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xylB xylB xylA xylA xylF xylF xylG xylG xylH xylH xylR xylR c4481 c4481
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xylBXylulose kinase; Escherichia coli K-12 ortholog: b3564; Escherichia coli O157:H7 ortholog: z4989. (484 aa)
xylAXylose isomerase; Escherichia coli K-12 ortholog: b3565; Escherichia coli O157:H7 ortholog: z4990; Belongs to the xylose isomerase family. (444 aa)
xylFD-xylose-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b3566; Escherichia coli O157:H7 ortholog: z4991. (356 aa)
xylGD-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (525 aa)
xylHXylose transport system permease protein xylH; Part of the binding-protein-dependent transport system for D- xylose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. AraH/RbsC subfamily. (393 aa)
xylRXylose operon Regulatory protein; Regulatory protein for the xylBAFGHR operon. (392 aa)
c4481Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z5688. (239 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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