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ydfH ydfH c2236 c2236 yebQ yebQ yieO yieO yieP yieP uxuR uxuR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydfHHypothetical transcriptional regulator ydfH; Escherichia coli K-12 ortholog: b1540; Escherichia coli O157:H7 ortholog: z2157. (228 aa)
c2236Transcriptional regulator kdgR; Escherichia coli K-12 ortholog: b1827; Escherichia coli O157:H7 ortholog: z2874. (263 aa)
yebQHypothetical transport protein yebQ; Escherichia coli K-12 ortholog: b1828; Escherichia coli O157:H7 ortholog: z2875. (494 aa)
yieOHypothetical transport protein yieO; Escherichia coli K-12 ortholog: b3754; Escherichia coli O157:H7 ortholog: z5255; Belongs to the major facilitator superfamily. (475 aa)
yiePHypothetical transcriptional regulator yieP; Escherichia coli K-12 ortholog: b3755; Escherichia coli O157:H7 ortholog: z5258. (230 aa)
uxuRUxu operon transcriptional regulator; Escherichia coli K-12 ortholog: b4324; Escherichia coli O157:H7 ortholog: z5922. (257 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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