STRINGSTRING
ygcX ygcX ygcY ygcY c3353 c3353 yhaD yhaD yhaE yhaE yhaF yhaF yhaU yhaU yhaG yhaG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ygcXGlucarate dehydratase; Escherichia coli K-12 ortholog: b2787; Escherichia coli O157:H7 ortholog: z4102; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (375 aa)
ygcYGlucarate dehydratase related protein; Escherichia coli K-12 ortholog: b2788; Escherichia coli O157:H7 ortholog: z4103. (446 aa)
c3353Probable glucarate transporter; D-glucarate permease; Escherichia coli K-12 ortholog: b2789; Escherichia coli O157:H7 ortholog: z4105. (450 aa)
yhaDGlycerate kinase 2; Escherichia coli K-12 ortholog: b3124; Escherichia coli O157:H7 ortholog: z4476; Belongs to the glycerate kinase type-1 family. (408 aa)
yhaE2-hydroxy-3-oxopropionate reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily. (299 aa)
yhaF2-dehydro-3-deoxyglucarate aldolase; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily. (256 aa)
yhaUProbable galactarate transporter; D-galactarate permease; Escherichia coli K-12 ortholog: b3127; Escherichia coli O157:H7 ortholog: z4479. (444 aa)
yhaGD-galactarate dehydratase; Catalyzes the dehydration of galactarate to form 5-dehydro-4- deoxy-D-glucarate. (523 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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