Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aldA | fucA | c1842 | c3368 | Aldehyde dehydrogenase A; Escherichia coli K-12 ortholog: b1415; Escherichia coli O157:H7 ortholog: z2306; Belongs to the aldehyde dehydrogenase family. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.580 |
| aldA | fucO | c1842 | c3367 | Aldehyde dehydrogenase A; Escherichia coli K-12 ortholog: b1415; Escherichia coli O157:H7 ortholog: z2306; Belongs to the aldehyde dehydrogenase family. | Lactaldehyde reductase; Escherichia coli K-12 ortholog: b2799; Escherichia coli O157:H7 ortholog: z4116. | 0.940 |
| aldA | rhaD | c1842 | c4851 | Aldehyde dehydrogenase A; Escherichia coli K-12 ortholog: b1415; Escherichia coli O157:H7 ortholog: z2306; Belongs to the aldehyde dehydrogenase family. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.507 |
| c3369 | fucA | c3369 | c3368 | Hypothetical protein. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.501 |
| c3369 | fucO | c3369 | c3367 | Hypothetical protein. | Lactaldehyde reductase; Escherichia coli K-12 ortholog: b2799; Escherichia coli O157:H7 ortholog: z4116. | 0.459 |
| c3369 | fucP | c3369 | c3370 | Hypothetical protein. | L-fucose permease; Escherichia coli K-12 ortholog: b2801; Escherichia coli O157:H7 ortholog: z4118. | 0.434 |
| c4282 | rhaA | c4282 | c4852 | Hypothetical protein; Residues 1 to 43 of 43 are 95.34 pct identical to residues 460 to 502 of 502 from GenPept.129 : >gb|AAG58613.1|AE005572_11 (AE005572) putative xylulose kinase [Escherichia coli O157:H7 EDL933]. | L-rhamnose isomerase; Escherichia coli K-12 ortholog: b3903; Escherichia coli O157:H7 ortholog: z5447. | 0.519 |
| c4282 | yiiL | c4282 | c4850 | Hypothetical protein; Residues 1 to 43 of 43 are 95.34 pct identical to residues 460 to 502 of 502 from GenPept.129 : >gb|AAG58613.1|AE005572_11 (AE005572) putative xylulose kinase [Escherichia coli O157:H7 EDL933]. | Hypothetical protein yiiL; Involved in the anomeric conversion of L-rhamnose. | 0.568 |
| c4854 | rhaA | c4854 | c4852 | Hypothetical protein. | L-rhamnose isomerase; Escherichia coli K-12 ortholog: b3903; Escherichia coli O157:H7 ortholog: z5447. | 0.552 |
| c4854 | rhaB | c4854 | c4853 | Hypothetical protein. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. | 0.552 |
| c4854 | rhaR | c4854 | c4856 | Hypothetical protein. | L-rhamnose operon transcriptional activator rhaR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.592 |
| c4854 | rhaS | c4854 | c4855 | Hypothetical protein. | L-rhamnose operon Regulatory protein rhaS; Activates expression of the rhaBAD and rhaT operons. | 0.592 |
| fucA | aldA | c3368 | c1842 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Aldehyde dehydrogenase A; Escherichia coli K-12 ortholog: b1415; Escherichia coli O157:H7 ortholog: z2306; Belongs to the aldehyde dehydrogenase family. | 0.580 |
| fucA | c3369 | c3368 | c3369 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Hypothetical protein. | 0.501 |
| fucA | fucI | c3368 | c3371 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.766 |
| fucA | fucO | c3368 | c3367 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Lactaldehyde reductase; Escherichia coli K-12 ortholog: b2799; Escherichia coli O157:H7 ortholog: z4116. | 0.932 |
| fucA | fucP | c3368 | c3370 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fucose permease; Escherichia coli K-12 ortholog: b2801; Escherichia coli O157:H7 ortholog: z4118. | 0.526 |
| fucA | fucU | c3368 | c3374 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Fucose operon fucU protein; Involved in the anomeric conversion of L-fucose. | 0.550 |
| fucA | rhaD | c3368 | c4851 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.966 |
| fucI | fucA | c3371 | c3368 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.766 |
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