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oppA oppA oppB oppB oppC oppC oppD oppD oppF oppF mppA mppA dppF dppF dppD dppD dppC dppC dppB dppB dppA dppA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
oppAPeriplasmic oligopeptide-binding protein precursor; Escherichia coli K-12 ortholog: b1243; Escherichia coli O157:H7 ortholog: z2019. (567 aa)
oppBOligopeptide transport system permease protein oppB; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (306 aa)
oppCOligopeptide transport system permease protein oppC; Escherichia coli K-12 ortholog: b1245; Escherichia coli O157:H7 ortholog: z2021. (302 aa)
oppDOligopeptide transport ATP-binding protein oppD; Escherichia coli K-12 ortholog: b1246; Escherichia coli O157:H7 ortholog: z2022; Belongs to the ABC transporter superfamily. (337 aa)
oppFOligopeptide transport ATP-binding protein oppF; Escherichia coli K-12 ortholog: b1247; Escherichia coli O157:H7 ortholog: z2023; Belongs to the ABC transporter superfamily. (334 aa)
mppAPeriplasmic murein peptide-binding protein precursor; Escherichia coli K-12 ortholog: b1329; Escherichia coli O157:H7 ortholog: z2438. (544 aa)
dppFDipeptide transport ATP-binding protein dppF; Escherichia coli K-12 ortholog: b3540; Escherichia coli O157:H7 ortholog: z4957; Belongs to the ABC transporter superfamily. (334 aa)
dppDDipeptide transport ATP-binding protein dppD; Escherichia coli K-12 ortholog: b3541; Escherichia coli O157:H7 ortholog: z4958; Belongs to the ABC transporter superfamily. (327 aa)
dppCDipeptide transport system permease protein dppC; Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (300 aa)
dppBDipeptide transport system permease protein dppB; Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (339 aa)
dppAPeriplasmic dipeptide transport protein precursor; Dipeptide-binding protein; Escherichia coli K-12 ortholog: b3544; Escherichia coli O157:H7 ortholog: z4961. (535 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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