STRINGSTRING
yadF yadF yadG yadG yadH yadH yadI yadI yadE yadE focA_2 focA_2 yrdA yrdA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yadFProtein yadF; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (220 aa)
yadGHypothetical ABC transporter ATP-binding protein yadG; Escherichia coli K-12 ortholog: b0127; Escherichia coli O157:H7 ortholog: z0138. (308 aa)
yadHHypothetical protein yadH; Escherichia coli K-12 ortholog: b0128; Escherichia coli O157:H7 ortholog: z0139. (256 aa)
yadIPutative PTS system IIA component yadI; Escherichia coli K-12 ortholog: b0129; Escherichia coli O157:H7 ortholog: z0140. (146 aa)
yadEHypothetical protein yadE precursor; Escherichia coli K-12 ortholog: b0130; Escherichia coli O157:H7 ortholog: z0141. (409 aa)
focA_2Probable formate transporter 1; Involved in the bidirectional transport of formate. Belongs to the FNT transporter (TC 2.A.44) family. (398 aa)
yrdAProtein yrdA; Escherichia coli K-12 ortholog: b3279; Escherichia coli O157:H7 ortholog: z4650. (282 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.