STRINGSTRING
hofC hofC c0362 c0362 fhiA fhiA mchE mchE flhA flhA flhB flhB fliI fliI fliP fliP fliQ fliQ hlyB hlyB hlyD hlyD yghD yghD c3702 c3702 secG secG yheE yheE yheF yheF yheG yheG hofF hofF hofG hofG hofH hofH yheH yheH yheI yheI yheJ yheJ yheK yheK pshM pshM hofQ hofQ secE secE ytfN ytfN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hofCProtein transport protein hofC; Escherichia coli K-12 ortholog: b0106; Escherichia coli O157:H7 ortholog: z0116. (400 aa)
c0362Putative membrane spanning export protein; Escherichia coli O157:H7 ortholog: z0635. (420 aa)
fhiAFhiA protein; Escherichia coli K-12 ortholog: b0229; Escherichia coli O157:H7 ortholog: z0290. (579 aa)
mchEMicrocin H47 secretion protein; Residues 1 to 424 of 424 are 98.82 pct identical to residues 1 to 424 of 424 from SwissProt.40 : >sp|Q9EXN6|MCHE_ECOLI Microcin H47 secretion protein mchE. (424 aa)
flhAFlagellar biosynthesis protein flhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (717 aa)
flhBFlagellar biosynthetic protein flhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (382 aa)
fliIFlagellum-specific ATP synthase; Escherichia coli K-12 ortholog: b1941; Escherichia coli O157:H7 ortholog: z3031. (457 aa)
fliPFlagellar biosynthetic protein fliP precursor; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (245 aa)
fliQFlagellar biosynthetic protein fliQ; Required for the assembly of the rivet at the earliest stage of flagellar biosynthesis; Belongs to the FliQ/MopD/SpaQ family. (89 aa)
hlyBHemolysin B; Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). (707 aa)
hlyDResidues 1 to 478 of 478 are 98.95 pct identical to residues 1 to 478 of 478 from SwissProt.40 : >sp|P09986|HLY4_ECOLI Hemolysin secretion protein D, chromosomal. (478 aa)
yghDPutative general secretion pathway protein M-type yghD; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (178 aa)
c3702Hypothetical protein; Residues 1 to 137 of 137 are 98.54 pct identical to residues 189 to 325 of 325 from GenPept.129 : >gb|AAL60191.1|AF426313_11 (AF426313) hypothetical type II secretion protein GspK [Escherichia coli]. (137 aa)
secGProtein-export membrane protein secG; Involved in protein export. Participates in an early event of protein translocation (By similarity). (126 aa)
yheEProbable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324. (271 aa)
yheFProbable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325. (654 aa)
yheGProbable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (493 aa)
hofFPutative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327. (398 aa)
hofGPutative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
hofHPutative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
yheHProbable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
yheIProbable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
yheJProbable general secretion pathway protein K; Escherichia coli K-12 ortholog: b3332. (301 aa)
yheKProbable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633. (388 aa)
pshMPutative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334. (161 aa)
hofQProtein transport protein hofQ precursor; Escherichia coli K-12 ortholog: b3391; Escherichia coli O157:H7 ortholog: z4744. (412 aa)
secEPreprotein translocase secE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (127 aa)
ytfNHypothetical protein ytfN; Escherichia coli K-12 ortholog: b4221; Escherichia coli O157:H7 ortholog: z5832. (1259 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.