11 items (Escherichia coli CFT073) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yghD	Putative general secretion pathway protein M-type yghD; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (178 aa)
	pshM	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334. (161 aa)
	yheK	Probable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633. (388 aa)
	yheI	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
	yheH	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
	hofH	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
	hofG	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
	hofF	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327. (398 aa)
	yheG	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (493 aa)
	yheF	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325. (654 aa)
	yheE	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324. (271 aa)

Your Current Organism:

Escherichia coli CFT073

NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hofF	hofG	c4098	c4099	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	0.995
hofF	hofH	c4098	c4100	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329.	0.981
hofF	pshM	c4098	c4105	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334.	0.992
hofF	yheE	c4098	c4095	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324.	0.988
hofF	yheF	c4098	c4096	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325.	0.972
hofF	yheG	c4098	c4097	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.999
hofF	yheH	c4098	c4101	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741.	0.979
hofF	yheI	c4098	c4102	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331.	0.981
hofF	yheK	c4098	c4104	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633.	0.991
hofG	hofF	c4099	c4098	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	0.995
hofG	hofH	c4099	c4100	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329.	0.991
hofG	pshM	c4099	c4105	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334.	0.927
hofG	yghD	c4099	c3699	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Putative general secretion pathway protein M-type yghD; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.481
hofG	yheE	c4099	c4095	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324.	0.970
hofG	yheF	c4099	c4096	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325.	0.985
hofG	yheG	c4099	c4097	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.995
hofG	yheH	c4099	c4101	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741.	0.983
hofG	yheI	c4099	c4102	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331.	0.992
hofG	yheK	c4099	c4104	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	Probable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633.	0.941
hofH	hofF	c4100	c4098	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329.	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	0.981