Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hdeA | hdeB | c4321 | c4320 | Protein hdeA precursor; Required for optimal acid stress protection. Exhibits a chaperone-like activity only at low pH by suppressing non-specifically the aggregation of denaturated periplasmic proteins. Belongs to the HdeA family. | Protein hdeB precursor; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | 0.999 |
| hdeB | hdeA | c4320 | c4321 | Protein hdeB precursor; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. | Protein hdeA precursor; Required for optimal acid stress protection. Exhibits a chaperone-like activity only at low pH by suppressing non-specifically the aggregation of denaturated periplasmic proteins. Belongs to the HdeA family. | 0.999 |
| treA | treF | c1654 | c4330 | Periplasmic trehalase precursor; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system; Belongs to the glycosyl hydrolase 37 family. | Probable cytoplasmic trehalase; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity. | 0.905 |
| treF | treA | c4330 | c1654 | Probable cytoplasmic trehalase; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity. | Periplasmic trehalase precursor; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system; Belongs to the glycosyl hydrolase 37 family. | 0.905 |
| ycgF | ycgZ | c1606 | c1607 | Hypothetical protein ycgF; Escherichia coli K-12 ortholog: b1163. | Hypothetical protein ycgZ; Escherichia coli K-12 ortholog: b1164. | 0.618 |
| ycgF | ymgB | c1606 | c1609 | Hypothetical protein ycgF; Escherichia coli K-12 ortholog: b1163. | Hypothetical protein ymgB; Regulates expression of genes involved in acid-resistance and biofilm formation. May be a non-specific DNA-binding protein that binds genes and/or intergenic regions via a geometric recognition (By similarity); Belongs to the AriR family. | 0.414 |
| ycgZ | ycgF | c1607 | c1606 | Hypothetical protein ycgZ; Escherichia coli K-12 ortholog: b1164. | Hypothetical protein ycgF; Escherichia coli K-12 ortholog: b1163. | 0.618 |
| ycgZ | ymgB | c1607 | c1609 | Hypothetical protein ycgZ; Escherichia coli K-12 ortholog: b1164. | Hypothetical protein ymgB; Regulates expression of genes involved in acid-resistance and biofilm formation. May be a non-specific DNA-binding protein that binds genes and/or intergenic regions via a geometric recognition (By similarity); Belongs to the AriR family. | 0.965 |
| ymgB | ycgF | c1609 | c1606 | Hypothetical protein ymgB; Regulates expression of genes involved in acid-resistance and biofilm formation. May be a non-specific DNA-binding protein that binds genes and/or intergenic regions via a geometric recognition (By similarity); Belongs to the AriR family. | Hypothetical protein ycgF; Escherichia coli K-12 ortholog: b1163. | 0.414 |
| ymgB | ycgZ | c1609 | c1607 | Hypothetical protein ymgB; Regulates expression of genes involved in acid-resistance and biofilm formation. May be a non-specific DNA-binding protein that binds genes and/or intergenic regions via a geometric recognition (By similarity); Belongs to the AriR family. | Hypothetical protein ycgZ; Escherichia coli K-12 ortholog: b1164. | 0.965 |