STRINGSTRING
ynhC ynhC ydhD ydhD ynhD ynhD bolA bolA ynhE ynhE yrbA yrbA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ynhCSufD protein; Escherichia coli K-12 ortholog: b1681; Escherichia coli O157:H7 ortholog: z2709. (423 aa)
ydhDProtein ydhD; Monothiol glutaredoxin involved in the biogenesis of iron- sulfur clusters. (115 aa)
ynhDProbable ATP-dependent transporter sufC; Escherichia coli K-12 ortholog: b1682; Escherichia coli O157:H7 ortholog: z2710. (248 aa)
bolABolA protein; Transcriptional regulator that plays an important role in general stress response. (116 aa)
ynhESufB protein; Escherichia coli K-12 ortholog: b1683; Escherichia coli O157:H7 ortholog: z2711. (508 aa)
yrbAProtein yrbA; Involved in cell resistance against acid stress. (89 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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