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dmsA dmsA fdhF fdhF fdoG fdoG fdnG fdnG bisC bisC narG narG nuoG nuoG napA napA bisZ bisZ ynfF ynfF ynfE ynfE ydeP ydeP narZ narZ torA torA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dmsAAnaerobic dimethyl sulfoxide reductase chain A precursor; Escherichia coli K-12 ortholog: b0894; Escherichia coli O157:H7 ortholog: z1240; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa)
fdhFFormate dehydrogenase H; Escherichia coli K-12 ortholog: b4079; Escherichia coli O157:H7 ortholog: z5678; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (715 aa)
fdoGFormate dehydrogenase-O, major subunit; Escherichia coli K-12 ortholog: b3894; Escherichia coli O157:H7 ortholog: z5436. (1016 aa)
fdnGFormate dehydrogenase, nitrate-inducible, major subunit; Escherichia coli K-12 ortholog: b1474; Escherichia coli O157:H7 ortholog: z2236. (1015 aa)
bisCBiotin sulfoxide reductase; Escherichia coli K-12 ortholog: b3551; Escherichia coli O157:H7 ortholog: z4976; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (777 aa)
narGRespiratory nitrate reductase 1 alpha chain; Escherichia coli K-12 ortholog: b1224; Escherichia coli O157:H7 ortholog: z2001; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa)
nuoGNADH dehydrogenase I chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity). (910 aa)
napAPeriplasmic nitrate reductase precursor; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa)
bisZTrimethylamine-N-oxide reductase 2 precursor; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. Can also reduce other N- and S-oxide compounds such as 4-methylmorpholine-N- oxide and biotin sulfoxide (BSO), but with a lower catalytic efficiency (By similarity); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (815 aa)
ynfFProbable dimethyl sulfoxide reductase chain ynfF precursor; Escherichia coli K-12 ortholog: b1588; Escherichia coli O157:H7 ortholog: z2576; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (808 aa)
ynfEPutative dimethyl sulfoxide reductase chain ynfE precursor; Escherichia coli K-12 ortholog: b1587; Escherichia coli O157:H7 ortholog: z2575; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (808 aa)
ydePHypothetical protein ydeP; Probably involved in acid resistance; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (759 aa)
narZRespiratory nitrate reductase 2 alpha chain; Escherichia coli K-12 ortholog: b1468; Escherichia coli O157:H7 ortholog: z2244; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1287 aa)
torATrimethylamine-N-oxide reductase 1 precursor; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. (848 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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