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yebA yebA crr crr nlpD nlpD yibP yibP bglF bglF nagE nagE ygeR ygeR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yebAHypothetical protein yebA precursor; A murein DD-endopeptidase with specificity for D-Ala-meso- diaminopimelic acid (mDAP) cross-links. Its role is probably to cleave D-Ala-mDAP cross-links to allow insertion of new glycans and thus cell wall expansion. Functionally redundant with MepM and MepH (By similarity); Belongs to the peptidase M23B family. (440 aa)
crrPTS system, glucose-specific IIA component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II complex composed of PtsG and Crr is involved in glucose transport. (169 aa)
nlpDLipoprotein nlpD precursor; Escherichia coli K-12 ortholog: b2742; Escherichia coli O157:H7 ortholog: z4050. (379 aa)
yibPHypothetical protein yibP; Escherichia coli K-12 ortholog: b3613; Escherichia coli O157:H7 ortholog: z5040. (427 aa)
bglFPTS system, beta-glucoside-specific IIABC component; EIIABC-Bgl; Escherichia coli K-12 ortholog: b3722. (649 aa)
nagEPTS system, N-acetylglucosamine-specific IIABC component; EIIABC-NAG; Escherichia coli K-12 ortholog: b0679; Escherichia coli O157:H7 ortholog: z0826. (648 aa)
ygeRHypothetical lipoprotein ygeR precursor; Escherichia coli K-12 ortholog: b2865; Escherichia coli O157:H7 ortholog: z4203. (259 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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