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pbpG pbpG dacA dacA dacC dacC dacD dacD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pbpGPenicillin-binding protein 7 precursor; PBP-7; Escherichia coli K-12 ortholog: b2134; Escherichia coli O157:H7 ortholog: z3383; Belongs to the peptidase S11 family. (313 aa)
dacAPenicillin-binding protein 5 precursor; Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Belongs to the peptidase S11 family. (403 aa)
dacCPenicillin-binding protein 6 precursor; D-alanyl-D-alanine carboxypeptidase fraction C; Escherichia coli K-12 ortholog: b0839; Escherichia coli O157:H7 ortholog: z1066; Belongs to the peptidase S11 family. (407 aa)
dacDPenicillin-binding protein 6B precursor; D-alanyl-D-alanine carboxypeptidase; Escherichia coli K-12 ortholog: b2010; Escherichia coli O157:H7 ortholog: z3171; Belongs to the peptidase S11 family. (390 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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