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yheI yheI upaG upaG yheJ yheJ yheH yheH hofH hofH hofG hofG ppdA ppdA c2395 c2395 c2394 c2394 ppdD ppdD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yheIProbable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
upaGPutative adhesin; Mediates aggregation, biofilm formation and adhesion to a range of extracellular matrix (ECM) proteins, such as fibronectin, fibrinogen, laminin and collagen types I, II, III, and V. Mediates adhesion to human T24 bladder epithelial cells. (1778 aa)
yheJProbable general secretion pathway protein K; Escherichia coli K-12 ortholog: b3332. (301 aa)
yheHProbable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
hofHPutative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
hofGPutative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
ppdAPrepilin peptidase dependent protein A precursor; Escherichia coli K-12 ortholog: b2826; Escherichia coli O157:H7 ortholog: z4143. (156 aa)
c2395Putative type IV pilin protein precursor; Residues 7 to 184 of 185 are 27.37 pct identical to residues 21 to 183 of 185 from GenPept.129 : >dbj|BAB12642.1| (AP002527) 30 pct identical(11 gaps) to gp:D88588_15[PilS of plasmid R64] [Escherichia coli]. (185 aa)
c2394PilV-like protein; Residues 5 to 407 of 487 are 26.82 pct identical to residues 6 to 347 of 417 from GenPept.129 : >dbj|BAB12639.1| (AP002527) 100 pct identical to gp:ECINCI2_2[PilV of plasmid R721]; 48 pct identical(7 gaps) to397 residues of 474 aa protein gp:D88588_18[PilV of plasmid R64] [Escherichia coli]. (487 aa)
ppdDPrepilin peptidase dependent protein D precursor; Escherichia coli K-12 ortholog: b0108; Escherichia coli O157:H7 ortholog: z0118. (146 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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