Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| artM | artQ | c0994 | c0995 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | 0.994 |
| artM | glnP | c0994 | c0895 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamine transport system permease protein glnP; Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane. | 0.522 |
| artM | gltJ | c0994 | c0738 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamate/aspartate transport system permease protein gltJ; Part of the ABC transporter complex GltIJKL involved in glutamate and aspartate uptake. Probably responsible for the translocation of the substrate across the membrane. | 0.533 |
| artM | gltK | c0994 | c0737 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamate/aspartate transport system permease protein gltK; Part of the ABC transporter complex GltIJKL involved in glutamate and aspartate uptake. Probably responsible for the translocation of the substrate across the membrane. | 0.537 |
| artM | hisM | c0994 | c2849 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Histidine transport system permease protein hisM; Part of the histidine permease ABC transporter. Also part of a lysine/arginine/ornithine transporter. Probably responsible for the translocation of the substrate across the membrane. Required to relay the ATPase-inducing signal from the solute-binding protein to HisP (By similarity). | 0.499 |
| artM | hisQ | c0994 | c2850 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Histidine transport system permease protein hisQ; Escherichia coli K-12 ortholog: b2308; Escherichia coli O157:H7 ortholog: z3570. | 0.663 |
| artM | ugpE | c0994 | c4240 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | SN-glycerol-3-phosphate transport system permease protein ugpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | 0.426 |
| artM | yecS | c0994 | c2332 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yecS; Part of the ABC transporter complex FliY-YecC-YecS involved in L-cystine transport. Probably responsible for the translocation of the substrate across the membrane. | 0.482 |
| artM | yhdX | c0994 | c4035 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yhdX; Escherichia coli K-12 ortholog: b3269; Escherichia coli O157:H7 ortholog: z4630. | 0.738 |
| artM | yhdY | c0994 | c4036 | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yhdY; Escherichia coli K-12 ortholog: b3270; Escherichia coli O157:H7 ortholog: z4631. | 0.815 |
| artQ | artM | c0995 | c0994 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Arginine transport system permease protein artM; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | 0.994 |
| artQ | glnP | c0995 | c0895 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamine transport system permease protein glnP; Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane. | 0.538 |
| artQ | gltJ | c0995 | c0738 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamate/aspartate transport system permease protein gltJ; Part of the ABC transporter complex GltIJKL involved in glutamate and aspartate uptake. Probably responsible for the translocation of the substrate across the membrane. | 0.567 |
| artQ | gltK | c0995 | c0737 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Glutamate/aspartate transport system permease protein gltK; Part of the ABC transporter complex GltIJKL involved in glutamate and aspartate uptake. Probably responsible for the translocation of the substrate across the membrane. | 0.546 |
| artQ | hisM | c0995 | c2849 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Histidine transport system permease protein hisM; Part of the histidine permease ABC transporter. Also part of a lysine/arginine/ornithine transporter. Probably responsible for the translocation of the substrate across the membrane. Required to relay the ATPase-inducing signal from the solute-binding protein to HisP (By similarity). | 0.728 |
| artQ | hisQ | c0995 | c2850 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Histidine transport system permease protein hisQ; Escherichia coli K-12 ortholog: b2308; Escherichia coli O157:H7 ortholog: z3570. | 0.460 |
| artQ | ugpE | c0995 | c4240 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | SN-glycerol-3-phosphate transport system permease protein ugpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. | 0.404 |
| artQ | yecS | c0995 | c2332 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yecS; Part of the ABC transporter complex FliY-YecC-YecS involved in L-cystine transport. Probably responsible for the translocation of the substrate across the membrane. | 0.507 |
| artQ | yhdX | c0995 | c4035 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yhdX; Escherichia coli K-12 ortholog: b3269; Escherichia coli O157:H7 ortholog: z4630. | 0.509 |
| artQ | yhdY | c0995 | c4036 | Arginine transport system permease protein artQ; Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane (By similarity). | Hypothetical amino-acid ABC transporter permease protein yhdY; Escherichia coli K-12 ortholog: b3270; Escherichia coli O157:H7 ortholog: z4631. | 0.551 |
page 1 of 13