STRINGSTRING
ytfT ytfT yjfF yjfF araH araH mglC mglC yphD yphD c4015 c4015 livM livM livH livH xylH xylH rbsC rbsC yjcV yjcV
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ytfTHypothetical ABC transporter permease protein ytfT; Escherichia coli K-12 ortholog: b4230; Escherichia coli O157:H7 ortholog: z5840; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
yjfFHypothetical ABC transporter permease protein yjfF; Escherichia coli K-12 ortholog: b4231; Escherichia coli O157:H7 ortholog: z5841; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
araHHigh-affinity L-arabinose transport system; Escherichia coli K-12 ortholog: b1899; Escherichia coli O157:H7 ortholog: z2951; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
mglCGalactoside transport system permease protein mglC; Escherichia coli K-12 ortholog: b2148; Escherichia coli O157:H7 ortholog: z3403; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
yphDHypothetical ABC transporter permease protein yphD; Escherichia coli K-12 ortholog: b2546; Escherichia coli O157:H7 ortholog: z3819; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
c4015Ribose transport system permease protein rbsC; Escherichia coli K-12 ortholog: b3750; Escherichia coli O157:H7 ortholog: z5690; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
livMHigh-affinity branched-chain amino acid transport system permease protein livM; LIV-I protein M; Escherichia coli K-12 ortholog: b3456; Escherichia coli O157:H7 ortholog: z4826; Belongs to the binding-protein-dependent transport system permease family. (425 aa)
livHHigh-affinity branched-chain amino acid transport system permease protein livH; LIV-I protein H; Escherichia coli K-12 ortholog: b3457; Escherichia coli O157:H7 ortholog: z4827; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
xylHXylose transport system permease protein xylH; Part of the binding-protein-dependent transport system for D- xylose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. AraH/RbsC subfamily. (393 aa)
rbsCRibose transport system permease protein rbsC; Part of the ABC transporter complex RbsABC involved in ribose import. Probably responsible for the translocation of the substrate across the membrane. (321 aa)
yjcVD-allose transport system permease protein alsC; Escherichia coli K-12 ortholog: b4086; Escherichia coli O157:H7 ortholog: z5251; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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