STRINGSTRING
yheI yheI ppdD ppdD c2395 c2395 ppdC ppdC ppdB ppdB ppdA ppdA hofG hofG hofH hofH yheH yheH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yheIProbable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
ppdDPrepilin peptidase dependent protein D precursor; Escherichia coli K-12 ortholog: b0108; Escherichia coli O157:H7 ortholog: z0118. (146 aa)
c2395Putative type IV pilin protein precursor; Residues 7 to 184 of 185 are 27.37 pct identical to residues 21 to 183 of 185 from GenPept.129 : >dbj|BAB12642.1| (AP002527) 30 pct identical(11 gaps) to gp:D88588_15[PilS of plasmid R64] [Escherichia coli]. (185 aa)
ppdCPrepilin peptidase dependent protein C precursor; Escherichia coli K-12 ortholog: b2823; Escherichia coli O157:H7 ortholog: z4140. (107 aa)
ppdBPrepilin peptidase dependent protein B precursor; Escherichia coli K-12 ortholog: b2825; Escherichia coli O157:H7 ortholog: z4142. (195 aa)
ppdAPrepilin peptidase dependent protein A precursor; Escherichia coli K-12 ortholog: b2826; Escherichia coli O157:H7 ortholog: z4143. (156 aa)
hofGPutative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
hofHPutative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
yheHProbable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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