STRINGSTRING
yliD yliD oppC oppC sapC sapC yejE yejE dppC dppC yddQ yddQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yliDHypothetical ABC transporter permease protein yliD; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane. (303 aa)
oppCOligopeptide transport system permease protein oppC; Escherichia coli K-12 ortholog: b1245; Escherichia coli O157:H7 ortholog: z2021. (302 aa)
sapCPeptide transport system permease protein sapC; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (296 aa)
yejEHypothetical ABC transporter permease protein yejE; Escherichia coli K-12 ortholog: b2179; Escherichia coli O157:H7 ortholog: z3438. (341 aa)
dppCDipeptide transport system permease protein dppC; Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily. (300 aa)
yddQHypothetical ABC transporter permease protein yddQ; Escherichia coli K-12 ortholog: b1485; Escherichia coli O157:H7 ortholog: z2225. (277 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (16%) [HD]