STRINGSTRING
alsB alsB ypdA_1 ypdA_1 cheY_1 cheY_1 kinE_1 kinE_1 kinE_2 kinE_2 arlR arlR arlS arlS ARK29133.1 ARK29133.1 cssR cssR cssS cssS kinE_3 kinE_3 kinE_4 kinE_4 walR walR walK walK ypdA_2 ypdA_2 ypdB ypdB cstA_2 cstA_2 ypdA_3 ypdA_3 ARK29821.1 ARK29821.1 yycF_1 yycF_1 phoR_1 phoR_1 ARK30068.1 ARK30068.1 ARK30069.1 ARK30069.1 adaA adaA msmE_2 msmE_2 ARK30133.1 ARK30133.1 yehU yehU ARK30135.1 ARK30135.1 resD resD hssR hssR hssS hssS kinD_1 kinD_1 hhoB hhoB yycG_1 yycG_1 srrA_3 srrA_3 ARK31137.1 ARK31137.1 ARK31225.1 ARK31225.1 ARK31226.1 ARK31226.1 lytR_1 lytR_1 kinE_6 kinE_6 spo0A_2 spo0A_2 phoR_2 phoR_2 phoP phoP yugI_2 yugI_2 kinE_7 kinE_7 phoR_3 phoR_3 spo0A_3 spo0A_3 kinA_5 kinA_5 ARK32672.1 ARK32672.1 bm3R1 bm3R1 phoR_4 phoR_4 srrA_4 srrA_4 hcf136 hcf136 ARK32677.1 ARK32677.1 spo0F spo0F kinA_7 kinA_7 rlmH rlmH ARK32894.1 ARK32894.1 htrB htrB yycJ_2 yycJ_2 yycI yycI yycH yycH yycG_2 yycG_2 yycF_2 yycF_2 mepM_2 mepM_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alsBD-allose-binding periplasmic protein precursor. (332 aa)
ypdA_1Sensor histidine kinase YpdA. (474 aa)
cheY_1Chemotaxis protein CheY. (525 aa)
kinE_1Sporulation kinase E. (429 aa)
kinE_2Sporulation kinase E. (752 aa)
arlRResponse regulator ArlR. (233 aa)
arlSSignal transduction histidine-protein kinase ArlS. (707 aa)
ARK29133.1Peptidase propeptide and YPEB domain protein. (198 aa)
cssRTranscriptional regulatory protein CssR. (227 aa)
cssSSensor histidine kinase CssS. (455 aa)
kinE_3Sporulation kinase E. (428 aa)
kinE_4Sporulation kinase E. (378 aa)
walRTranscriptional regulatory protein WalR. (229 aa)
walKSensor protein kinase WalK. (739 aa)
ypdA_2Sensor histidine kinase YpdA. (585 aa)
ypdBTranscriptional regulatory protein YpdB. (244 aa)
cstA_2Carbon starvation protein A. (480 aa)
ypdA_3Sensor histidine kinase YpdA. (584 aa)
ARK29821.1Putative response regulatory protein. (388 aa)
yycF_1Transcriptional regulatory protein YycF. (232 aa)
phoR_1Alkaline phosphatase synthesis sensor protein PhoR. (460 aa)
ARK30068.1Hypothetical protein. (54 aa)
ARK30069.1Putative sensor-like histidine kinase. (602 aa)
adaABifunctional transcriptional activator/DNA repair enzyme AdaA. (391 aa)
msmE_2Multiple sugar-binding protein precursor. (453 aa)
ARK30133.1Putative response regulatory protein. (254 aa)
yehUSensor histidine kinase YehU. (262 aa)
ARK30135.1Hypothetical protein. (227 aa)
resDTranscriptional regulatory protein ResD. (237 aa)
hssRHeme response regulator HssR. (222 aa)
hssSHeme sensor protein HssS. (434 aa)
kinD_1Sporulation kinase D. (502 aa)
hhoBPutative serine protease HhoB precursor. (266 aa)
yycG_1Sensor histidine kinase YycG. (463 aa)
srrA_3Transcriptional regulatory protein SrrA. (228 aa)
ARK31137.1Hypothetical protein. (321 aa)
ARK31225.1Putative response regulatory protein. (515 aa)
ARK31226.1Putative sensor-like histidine kinase. (585 aa)
lytR_1Sensory transduction protein LytR. (240 aa)
kinE_6Sporulation kinase E. (343 aa)
spo0A_2Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (285 aa)
phoR_2Alkaline phosphatase synthesis sensor protein PhoR. (592 aa)
phoPAlkaline phosphatase synthesis transcriptional regulatory protein PhoP. (239 aa)
yugI_2General stress protein 13. (140 aa)
kinE_7Sporulation kinase E. (548 aa)
phoR_3Putative membrane protein SCO5905; Frameshift. (472 aa)
spo0A_3Stage 0 sporulation protein A. (175 aa)
kinA_5Sporulation kinase A. (556 aa)
ARK32672.1ABC-2 family transporter protein. (843 aa)
bm3R1HTH-type transcriptional repressor Bm3R1. (194 aa)
phoR_4Alkaline phosphatase synthesis sensor protein PhoR. (458 aa)
srrA_4Transcriptional regulatory protein SrrA. (227 aa)
hcf136Ycf48-like protein. (297 aa)
ARK32677.1Hypothetical protein. (195 aa)
spo0FSporulation initiation phosphotransferase F. (120 aa)
kinA_7Sporulation kinase A. (402 aa)
rlmHRibosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (159 aa)
ARK32894.1Hypothetical protein. (53 aa)
htrBSerine protease Do-like HtrB. (406 aa)
yycJ_2Putative metallo-hydrolase YycJ. (265 aa)
yycITwo-component system YycFG regulatory protein. (257 aa)
yycHTwo-component system YycF/YycG regulatory protein YycH. (447 aa)
yycG_2Sensor histidine kinase YycG. (608 aa)
yycF_2Transcriptional regulatory protein YycF. (237 aa)
mepM_2Murein DD-endopeptidase MepM. (477 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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