STRINGSTRING
liaS_2 liaS_2 vraR vraR gerE_3 gerE_3 degU_2 degU_2 degS degS comA comA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
liaS_2ABC-2 family transporter protein; Frameshift. (368 aa)
vraRResponse regulator protein VraR. (201 aa)
gerE_3Spore germination protein GerE. (74 aa)
degU_2Transcriptional regulatory protein DegU. (233 aa)
degSSignal transduction histidine-protein kinase/phosphatase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. (374 aa)
comATranscriptional regulatory protein ComA. (214 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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