STRINGSTRING
livF_3 livF_3 cysA cysA ARK32771.1 ARK32771.1 livH_3 livH_3 amiC amiC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
livF_3High-affinity branched-chain amino acid transport ATP-binding protein LivF. (230 aa)
cysASulfate/thiosulfate import ATP-binding protein CysA. (264 aa)
ARK32771.1Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (363 aa)
livH_3High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (301 aa)
amiCAliphatic amidase expression-regulating protein. (420 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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