STRINGSTRING
oppF_1 oppF_1 oppD_1 oppD_1 gsiC_1 gsiC_1 gsiD_1 gsiD_1 gsiB_1 gsiB_1 nikB nikB oppD_2 oppD_2 oppF_2 oppF_2 gsiB_2 gsiB_2 gsiB_3 gsiB_3 gsiC_2 gsiC_2 gsiC_3 gsiC_3 gsiD_3 gsiD_3 gsiC_4 gsiC_4 nikC_2 nikC_2 gsiA gsiA dppC_2 dppC_2 gsiC_6 gsiC_6 appA_2 appA_2 oppF_6 oppF_6 oppD_5 oppD_5 oppF_7 oppF_7 oppD_6 oppD_6 gsiC_7 gsiC_7 gsiB_6 gsiB_6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
oppF_1Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (336 aa)
oppD_1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (342 aa)
gsiC_1Glutathione transport system permease protein GsiC. (313 aa)
gsiD_1Glutathione transport system permease protein GsiD. (298 aa)
gsiB_1Glutathione-binding protein GsiB precursor. (537 aa)
nikBNickel-binding periplasmic protein precursor; Frameshift. (314 aa)
oppD_2Nickel transport system permease protein NikC; Frameshift. (276 aa)
oppF_2Oligopeptide transport ATP-binding protein OppF. (269 aa)
gsiB_2Glutathione-binding protein GsiB precursor. (541 aa)
gsiB_3Glutathione-binding protein GsiB precursor. (537 aa)
gsiC_2Glutathione transport system permease protein GsiC. (71 aa)
gsiC_3Glutathione transport system permease protein GsiC. (247 aa)
gsiD_3Glutathione transport system permease protein GsiD. (298 aa)
gsiC_4Glutathione-binding protein GsiB precursor; Frameshift. (311 aa)
nikC_2Nickel transport system permease protein NikC. (272 aa)
gsiAGlutathione import ATP-binding protein GsiA. (505 aa)
dppC_2Dipeptide transport system permease protein DppC. (304 aa)
gsiC_6Glutathione transport system permease protein GsiC. (315 aa)
appA_2Oligopeptide-binding protein AppA precursor. (544 aa)
oppF_6Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (336 aa)
oppD_5Oligopeptide transport ATP-binding protein OppD. (191 aa)
oppF_7Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (332 aa)
oppD_6Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (330 aa)
gsiC_7Glutathione transport system permease protein GsiD; Frameshift. (317 aa)
gsiB_6Glutathione-binding protein GsiB precursor. (536 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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