STRINGSTRING
oppF_1 oppF_1 oppD_1 oppD_1 gsiC_1 gsiC_1 gsiD_1 gsiD_1 gsiB_1 gsiB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
oppF_1Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (336 aa)
oppD_1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (342 aa)
gsiC_1Glutathione transport system permease protein GsiC. (313 aa)
gsiD_1Glutathione transport system permease protein GsiD. (298 aa)
gsiB_1Glutathione-binding protein GsiB precursor. (537 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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