STRINGSTRING
gsiC_4 gsiC_4 nikC_2 nikC_2 gsiA gsiA oppF_7 oppF_7 oppD_6 oppD_6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gsiC_4Glutathione-binding protein GsiB precursor; Frameshift. (311 aa)
nikC_2Nickel transport system permease protein NikC. (272 aa)
gsiAGlutathione import ATP-binding protein GsiA. (505 aa)
oppF_7Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (332 aa)
oppD_6Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (330 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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