Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARK28906.1 | paaA_1 | BkAM31D_03000 | BkAM31D_02985 | Phenylacetic acid catabolic protein. | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 0.994 |
| ARK28906.1 | paaA_2 | BkAM31D_03000 | BkAM31D_07665 | Phenylacetic acid catabolic protein. | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 0.977 |
| ARK29719.1 | luxA_1 | BkAM31D_07500 | BkAM31D_07490 | Luciferase-like monooxygenase. | Alkanal monooxygenase alpha chain. | 0.645 |
| ARK29719.1 | luxA_2 | BkAM31D_07500 | BkAM31D_07495 | Luciferase-like monooxygenase. | Alkanal monooxygenase alpha chain. | 0.994 |
| ARK29750.1 | paaA_1 | BkAM31D_07680 | BkAM31D_02985 | Phenylacetic acid catabolic protein. | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 0.781 |
| ARK29750.1 | paaA_2 | BkAM31D_07680 | BkAM31D_07665 | Phenylacetic acid catabolic protein. | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 0.948 |
| ARK29933.1 | pamO | BkAM31D_08685 | BkAM31D_08860 | Cytochrome P450(MEG). | Arylesterase; Frameshift. | 0.730 |
| ARK29933.1 | ptlI | BkAM31D_08685 | BkAM31D_11385 | Cytochrome P450(MEG). | Pentalenene oxygenase; Belongs to the cytochrome P450 family. | 0.681 |
| ARK29938.1 | pamO | BkAM31D_08710 | BkAM31D_08860 | Cytochrome P450-terp. | Arylesterase; Frameshift. | 0.734 |
| ARK29938.1 | ptlI | BkAM31D_08710 | BkAM31D_11385 | Cytochrome P450-terp. | Pentalenene oxygenase; Belongs to the cytochrome P450 family. | 0.643 |
| bioI | pamO | BkAM31D_02760 | BkAM31D_08860 | Biotin biosynthesis cytochrome P450. | Arylesterase; Frameshift. | 0.577 |
| des | hmp | BkAM31D_02770 | BkAM31D_06355 | Fatty acid desaturase. | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.593 |
| hmp | des | BkAM31D_06355 | BkAM31D_02770 | Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | Fatty acid desaturase. | 0.593 |
| luxA_1 | ARK29719.1 | BkAM31D_07490 | BkAM31D_07500 | Alkanal monooxygenase alpha chain. | Luciferase-like monooxygenase. | 0.645 |
| luxA_1 | luxA_2 | BkAM31D_07490 | BkAM31D_07495 | Alkanal monooxygenase alpha chain. | Alkanal monooxygenase alpha chain. | 0.654 |
| luxA_2 | ARK29719.1 | BkAM31D_07495 | BkAM31D_07500 | Alkanal monooxygenase alpha chain. | Luciferase-like monooxygenase. | 0.994 |
| luxA_2 | luxA_1 | BkAM31D_07495 | BkAM31D_07490 | Alkanal monooxygenase alpha chain. | Alkanal monooxygenase alpha chain. | 0.654 |
| paaA_1 | ARK28906.1 | BkAM31D_02985 | BkAM31D_03000 | 1,2-phenylacetyl-CoA epoxidase, subunit A. | Phenylacetic acid catabolic protein. | 0.994 |
| paaA_1 | ARK29750.1 | BkAM31D_02985 | BkAM31D_07680 | 1,2-phenylacetyl-CoA epoxidase, subunit A. | Phenylacetic acid catabolic protein. | 0.781 |
| paaA_1 | paaA_2 | BkAM31D_02985 | BkAM31D_07665 | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 1,2-phenylacetyl-CoA epoxidase, subunit A. | 0.901 |
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