STRINGSTRING
mutB mutB scpA_2 scpA_2 hemL2 hemL2 rsuA rsuA gpmI gpmI rbsD rbsD scpA_3 scpA_3 rluF rluF truA_1 truA_1 glmM glmM purE purE truA_2 truA_2 hemL1 hemL1 deoB_1 deoB_1 pgcA pgcA pheA pheA glgC_2 glgC_2 deoB_2 deoB_2 cobH cobH rluB rluB kamA kamA truB truB rluD_1 rluD_1 rluD_2 rluD_2 aroH aroH
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mutBMethylmalonyl-CoA mutase large subunit. (720 aa)
scpA_2Methylmalonyl-CoA mutase. (683 aa)
hemL2Glutamate-1-semialdehyde 2,1-aminomutase 2. (428 aa)
rsuARibosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. (237 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. (511 aa)
rbsDD-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (129 aa)
scpA_3Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1085 aa)
rluFRibosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. (238 aa)
truA_1tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (255 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (447 aa)
purEN5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (161 aa)
truA_2tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (244 aa)
hemL1Glutamate-1-semialdehyde 2,1-aminomutase 1. (431 aa)
deoB_1Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (391 aa)
pgcAPhosphoglucomutase. (578 aa)
pheAPrephenate dehydratase. (277 aa)
glgC_2Glucose-1-phosphate adenylyltransferase. (804 aa)
deoB_2Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (393 aa)
cobHPrecorrin-8X methylmutase. (215 aa)
rluBSuccinate-semialdehyde dehydrogenase [NADP(+)] GabD; Frameshift; Belongs to the pseudouridine synthase RsuA family. (249 aa)
kamAL-lysine 2,3-aminomutase. (467 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (307 aa)
rluD_1Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (304 aa)
rluD_2Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (303 aa)
aroHChorismate mutase AroH; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. (124 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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