STRINGSTRING
cph2_4 cph2_4 kinA_6 kinA_6 phoR_2 phoR_2 zraR_2 zraR_2 rocR_2 rocR_2 kinE_6 kinE_6 dcuS_1 dcuS_1 kinA_3 kinA_3 ARK31559.1 ARK31559.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cph2_4Phytochrome-like protein cph2. (560 aa)
kinA_6Sporulation kinase A. (595 aa)
phoR_2Alkaline phosphatase synthesis sensor protein PhoR. (592 aa)
zraR_2Transcriptional regulatory protein ZraR. (568 aa)
rocR_2Arginine utilization regulatory protein RocR. (663 aa)
kinE_6Sporulation kinase E. (343 aa)
dcuS_1Sensor histidine kinase DcuS. (551 aa)
kinA_3Sporulation kinase A. (349 aa)
ARK31559.1DNA-binding transcriptional regulator DhaR. (82 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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