STRINGSTRING
norG_1 norG_1 argD_1 argD_1 speA_2 speA_2 ARK30911.1 ARK30911.1 mdeA_2 mdeA_2 tpa_2 tpa_2 dapL_2 dapL_2 mccB mccB ARK30347.1 ARK30347.1 hisC hisC metI metI cobD cobD kynU kynU glyA glyA lysN_2 lysN_2 csd_2 csd_2 speA_1 speA_1 tpa_1 tpa_1 nifS_2 nifS_2 nifS_1 nifS_1 patB patB rocD rocD patA patA csd_1 csd_1 norG_2 norG_2 epsN epsN serC_2 serC_2 serC_1 serC_1 lysN_1 lysN_1 dapL_1 dapL_1 hemL1 hemL1 ectB ectB pucG pucG bioF bioF bioK bioK metC metC iscS iscS hemL2 hemL2 gcvPA gcvPA gcvPB gcvPB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
norG_1HTH-type transcriptional regulator NorG. (147 aa)
argD_1Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (405 aa)
speA_2Arginine decarboxylase. (491 aa)
ARK30911.1Methionine gamma-lyase. (417 aa)
mdeA_2Methionine gamma-lyase. (396 aa)
tpa_2Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)
dapL_2LL-diaminopimelate aminotransferase. (386 aa)
mccBCystathionine gamma-lyase. (394 aa)
ARK30347.1Aspartate aminotransferase. (394 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (366 aa)
metICystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase. (372 aa)
cobDThreonine-phosphate decarboxylase. (357 aa)
kynUKynurenine formamidase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (428 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
lysN_22-aminoadipate transaminase. (372 aa)
csd_2Putative cysteine desulfurase. (387 aa)
speA_1Arginine decarboxylase. (479 aa)
tpa_1Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)
nifS_2Cysteine desulfurase. (386 aa)
nifS_1Putative cysteine desulfurase NifS. (375 aa)
patBCystathionine beta-lyase PatB. (391 aa)
rocDOrnithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. (397 aa)
patAPutative N-acetyl-LL-diaminopimelate aminotransferase. (391 aa)
csd_1Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (406 aa)
norG_2HTH-type transcriptional regulator NorG. (479 aa)
epsNPutative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family. (374 aa)
serC_2Phosphoserine aminotransferase. (35 aa)
serC_1Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (325 aa)
lysN_12-aminoadipate transaminase. (402 aa)
dapL_1LL-diaminopimelate aminotransferase. (395 aa)
hemL1Glutamate-1-semialdehyde 2,1-aminomutase 1. (431 aa)
ectBDiaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa)
pucGPurine catabolism protein PucG. (410 aa)
bioF8-amino-7-oxononanoate synthase 2; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (390 aa)
bioKL-Lysine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (454 aa)
metCCystathionine beta-lyase. (380 aa)
iscSCysteine desulfurase. (380 aa)
hemL2Glutamate-1-semialdehyde 2,1-aminomutase 2. (428 aa)
gcvPAPutative glycine dehydrogenase (decarboxylating) subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (447 aa)
gcvPBPutative glycine dehydrogenase (decarboxylating) subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. (487 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.