Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARK29896.1 | frdB | BkAM31D_08480 | BkAM31D_18375 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Fumarate reductase iron-sulfur subunit. | 0.401 |
| ARK29896.1 | lutB | BkAM31D_08480 | BkAM31D_04820 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.651 |
| ARK32602.1 | frdB | BkAM31D_23525 | BkAM31D_18375 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Fumarate reductase iron-sulfur subunit. | 0.404 |
| ARK32602.1 | lutB | BkAM31D_23525 | BkAM31D_04820 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.651 |
| ARK32798.1 | dmsB | BkAM31D_24670 | BkAM31D_12175 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Assimilatory nitrate reductase catalytic subunit; Frameshift. | 0.608 |
| ARK32798.1 | frdB | BkAM31D_24670 | BkAM31D_18375 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Fumarate reductase iron-sulfur subunit. | 0.541 |
| ARK32798.1 | lutB | BkAM31D_24670 | BkAM31D_04820 | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.757 |
| dmsB | ARK32798.1 | BkAM31D_12175 | BkAM31D_24670 | Assimilatory nitrate reductase catalytic subunit; Frameshift. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.608 |
| fer_1 | queG | BkAM31D_02920 | BkAM31D_04095 | Ferredoxin. | Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. | 0.406 |
| frdB | ARK29896.1 | BkAM31D_18375 | BkAM31D_08480 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.401 |
| frdB | ARK32602.1 | BkAM31D_18375 | BkAM31D_23525 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.404 |
| frdB | ARK32798.1 | BkAM31D_18375 | BkAM31D_24670 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.541 |
| frdB | glpC | BkAM31D_18375 | BkAM31D_09585 | Fumarate reductase iron-sulfur subunit. | Levanase precursor; Frameshift. | 0.403 |
| glpC | frdB | BkAM31D_09585 | BkAM31D_18375 | Levanase precursor; Frameshift. | Fumarate reductase iron-sulfur subunit. | 0.403 |
| glpC | lutB | BkAM31D_09585 | BkAM31D_04820 | Levanase precursor; Frameshift. | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.651 |
| lutA_2 | lutB | BkAM31D_05095 | BkAM31D_04820 | Glycolate oxidase subunit GlcD; Frameshift. | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.893 |
| lutB | ARK29896.1 | BkAM31D_04820 | BkAM31D_08480 | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.651 |
| lutB | ARK32602.1 | BkAM31D_04820 | BkAM31D_23525 | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.651 |
| lutB | ARK32798.1 | BkAM31D_04820 | BkAM31D_24670 | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. | 0.757 |
| lutB | glpC | BkAM31D_04820 | BkAM31D_09585 | Lactate utilization protein B; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | Levanase precursor; Frameshift. | 0.651 |
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