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nasD_1 nasD_1 cdr cdr yumC_3 yumC_3 trxB_3 trxB_3 ndh ndh nasD_2 nasD_2 yumC_1 yumC_1 trxB_1 trxB_1 trxB_2 trxB_2 lpd lpd gltB gltB pdhD_1 pdhD_1 pdhD_2 pdhD_2 ARK31908.1 ARK31908.1 yumC_2 yumC_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nasD_1Nitrite reductase, NAD(P)H. (781 aa)
cdrCoenzyme A disulfide reductase. (435 aa)
yumC_3Ferredoxin--NADP reductase 2. (338 aa)
trxB_3Thioredoxin reductase. (314 aa)
ndhNADH dehydrogenase. (547 aa)
nasD_2Nitrite reductase, NAD(P)H; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (807 aa)
yumC_1Ferredoxin--NADP reductase 2. (330 aa)
trxB_1Thioredoxin reductase. (302 aa)
trxB_2Thioredoxin reductase. (187 aa)
lpdDihydrolipoyl dehydrogenase. (563 aa)
gltBGlutamate synthase [NADPH] large chain; Frameshift. (495 aa)
pdhD_1Dihydrolipoyl dehydrogenase. (469 aa)
pdhD_2Dihydrolipoyl dehydrogenase. (473 aa)
ARK31908.1NADH dehydrogenase-like protein. (399 aa)
yumC_2Ferredoxin--NADP reductase 2. (330 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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