STRINGSTRING
trxB_1 trxB_1 thiO thiO nadB nadB hemY hemY mhbM mhbM yumC_1 yumC_1 ARK28855.1 ARK28855.1 ARK28854.1 ARK28854.1 ARK28853.1 ARK28853.1 nasD_2 nasD_2 nasD_1 nasD_1 ARK32858.1 ARK32858.1 trxB_3 trxB_3 ARK32868.1 ARK32868.1 mqo1 mqo1 mnmG mnmG yumC_3 yumC_3 xlnD_2 xlnD_2 cdr cdr puuB_2 puuB_2 ndh ndh yumC_2 yumC_2 ARK31908.1 ARK31908.1 ytgP_2 ytgP_2 frdA frdA pdhD_2 pdhD_2 pdhD_1 pdhD_1 trmFO trmFO puo puo ubiF ubiF gltB gltB ARK30278.1 ARK30278.1 pamO pamO xlnD_1 xlnD_1 pcpB pcpB ifcA ifcA puuB_1 puuB_1 lpd lpd trxB_2 trxB_2 mnmC mnmC hcnC hcnC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trxB_1Thioredoxin reductase. (302 aa)
thiOGlycine oxidase. (369 aa)
nadBL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (524 aa)
hemYFerrochelatase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (468 aa)
mhbMGentisate 1,2-dioxygenase; Frameshift. (402 aa)
yumC_1Ferredoxin--NADP reductase 2. (330 aa)
ARK28855.1Hypothetical protein. (40 aa)
ARK28854.1Hypothetical protein. (46 aa)
ARK28853.1Salicylate hydroxylase. (75 aa)
nasD_2Nitrite reductase, NAD(P)H; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (807 aa)
nasD_1Nitrite reductase, NAD(P)H. (781 aa)
ARK32858.1Ferredoxin--NADP reductase. (477 aa)
trxB_3Thioredoxin reductase. (314 aa)
ARK32868.1Ferredoxin--NADP reductase. (320 aa)
mqo1Putative malate:quinone oxidoreductase 1. (510 aa)
mnmGtRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (628 aa)
yumC_3Ferredoxin--NADP reductase 2. (338 aa)
xlnD_23-hydroxybenzoate 6-hydroxylase 1. (399 aa)
cdrCoenzyme A disulfide reductase. (435 aa)
puuB_2Gamma-glutamylputrescine oxidoreductase. (513 aa)
ndhNADH dehydrogenase. (547 aa)
yumC_2Ferredoxin--NADP reductase 2. (330 aa)
ARK31908.1NADH dehydrogenase-like protein. (399 aa)
ytgP_2Putative cell division protein YtgP; Frameshift. (484 aa)
frdAFumarate reductase flavoprotein subunit. (589 aa)
pdhD_2Dihydrolipoyl dehydrogenase. (473 aa)
pdhD_1Dihydrolipoyl dehydrogenase. (469 aa)
trmFOMethylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (435 aa)
puoPutrescine oxidase. (446 aa)
ubiF2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. (366 aa)
gltBGlutamate synthase [NADPH] large chain; Frameshift. (495 aa)
ARK30278.1Ferredoxin--NADP reductase. (333 aa)
pamOArylesterase; Frameshift. (545 aa)
xlnD_13-hydroxybenzoate 6-hydroxylase 1. (422 aa)
pcpBPentachlorophenol 4-monooxygenase. (409 aa)
ifcAFumarate reductase flavoprotein subunit precursor. (455 aa)
puuB_1Gamma-glutamylputrescine oxidoreductase. (407 aa)
lpdDihydrolipoyl dehydrogenase. (563 aa)
trxB_2Thioredoxin reductase. (187 aa)
mnmCtRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC. (80 aa)
hcnCHydrogen cyanide synthase subunit HcnC precursor. (288 aa)
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.