(24 nodes) Mixed, incl. Polysaccharide transport, and Asparagine synthase network (Nitrosomonas sp. Nm58)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDY09259.1	Uncharacterized protein involved in exopolysaccharide biosynthesis. (661 aa)
	SDY21978.1	Hypothetical protein. (130 aa)
	SDY31571.1	Asparagine synthase (glutamine-hydrolysing). (615 aa)
	SDY31607.1	Diaminopimelate decarboxylase. (408 aa)
	SDY31659.1	acyl-CoA ligase (AMP-forming), exosortase A-associated. (527 aa)
	SDY31683.1	Two-component system, NtrC family, response regulator. (452 aa)
	SDY31717.1	Putative PEP-CTERM system histidine kinase. (693 aa)
	SDY31742.1	Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (465 aa)
	SDY31778.1	Trypsin-like peptidase domain-containing protein. (270 aa)
	SDY64370.1	Polysaccharide export outer membrane protein. (404 aa)
	SDY64429.1	Tyrosine-protein kinase Etk/Wzc. (761 aa)
	SDY73345.1	TPR repeat-containing protein. (193 aa)
	SDY86202.1	Putative PEP-CTERM system TPR-repeat lipoprotein. (929 aa)
	SDY97442.1	N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated. (272 aa)
	SDZ01203.1	Asparagine synthase (glutamine-hydrolysing). (644 aa)
	SDZ01227.1	Sugar transferase, PEP-CTERM/EpsH1 system associated. (381 aa)
	SDZ01273.1	Sugar transferase, PEP-CTERM/EpsH1 system associated. (410 aa)
	SDZ01291.1	FemAB-related protein, PEP-CTERM system-associated. (360 aa)
	SDZ01312.1	Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily. (279 aa)
	SDZ01333.1	Putative secretion ATPase, PEP-CTERM locus subfamily. (288 aa)
	SDZ01351.1	Uncharacterized protein, PEP-CTERM system associated. (509 aa)
	SDZ01369.1	exopolysaccharide/PEP-CTERM locus tyrosine autokinase. (300 aa)
	SDZ01391.1	Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily. (516 aa)
	SDZ01413.1	Polysaccharide export outer membrane protein. (208 aa)

Your Current Organism:

Nitrosomonas sp. Nm58

NCBI taxonomy Id: 200126
Other names: N. sp. Nm58

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDY09259.1	SDY21978.1	SAMN05421754_1001331	SAMN05421754_10044	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Hypothetical protein.	0.672
SDY09259.1	SDY31717.1	SAMN05421754_1001331	SAMN05421754_100668	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Putative PEP-CTERM system histidine kinase.	0.583
SDY09259.1	SDY31742.1	SAMN05421754_1001331	SAMN05421754_100669	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.	0.949
SDY09259.1	SDY31778.1	SAMN05421754_1001331	SAMN05421754_100670	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Trypsin-like peptidase domain-containing protein.	0.501
SDY09259.1	SDY64370.1	SAMN05421754_1001331	SAMN05421754_101630	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Polysaccharide export outer membrane protein.	0.672
SDY09259.1	SDY73345.1	SAMN05421754_1001331	SAMN05421754_101957	Uncharacterized protein involved in exopolysaccharide biosynthesis.	TPR repeat-containing protein.	0.627
SDY09259.1	SDY86202.1	SAMN05421754_1001331	SAMN05421754_102625	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Putative PEP-CTERM system TPR-repeat lipoprotein.	0.739
SDY09259.1	SDY97442.1	SAMN05421754_1001331	SAMN05421754_103712	Uncharacterized protein involved in exopolysaccharide biosynthesis.	N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated.	0.562
SDY09259.1	SDZ01227.1	SAMN05421754_1001331	SAMN05421754_104211	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Sugar transferase, PEP-CTERM/EpsH1 system associated.	0.647
SDY09259.1	SDZ01273.1	SAMN05421754_1001331	SAMN05421754_104213	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Sugar transferase, PEP-CTERM/EpsH1 system associated.	0.577
SDY09259.1	SDZ01291.1	SAMN05421754_1001331	SAMN05421754_104214	Uncharacterized protein involved in exopolysaccharide biosynthesis.	FemAB-related protein, PEP-CTERM system-associated.	0.617
SDY09259.1	SDZ01312.1	SAMN05421754_1001331	SAMN05421754_104215	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.	0.427
SDY09259.1	SDZ01351.1	SAMN05421754_1001331	SAMN05421754_104217	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Uncharacterized protein, PEP-CTERM system associated.	0.804
SDY09259.1	SDZ01369.1	SAMN05421754_1001331	SAMN05421754_104218	Uncharacterized protein involved in exopolysaccharide biosynthesis.	exopolysaccharide/PEP-CTERM locus tyrosine autokinase.	0.589
SDY09259.1	SDZ01391.1	SAMN05421754_1001331	SAMN05421754_104219	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.	0.610
SDY09259.1	SDZ01413.1	SAMN05421754_1001331	SAMN05421754_104220	Uncharacterized protein involved in exopolysaccharide biosynthesis.	Polysaccharide export outer membrane protein.	0.823
SDY21978.1	SDY09259.1	SAMN05421754_10044	SAMN05421754_1001331	Hypothetical protein.	Uncharacterized protein involved in exopolysaccharide biosynthesis.	0.672
SDY21978.1	SDY31742.1	SAMN05421754_10044	SAMN05421754_100669	Hypothetical protein.	Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.	0.927
SDY21978.1	SDY64429.1	SAMN05421754_10044	SAMN05421754_101632	Hypothetical protein.	Tyrosine-protein kinase Etk/Wzc.	0.980
SDY21978.1	SDZ01369.1	SAMN05421754_10044	SAMN05421754_104218	Hypothetical protein.	exopolysaccharide/PEP-CTERM locus tyrosine autokinase.	0.599