5 items (Aegilops tauschii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A453CPT6	Uncharacterized protein. (257 aa)
	A0A453F309	Uncharacterized protein. (460 aa)
	A0A453MXY7	Uncharacterized protein. (224 aa)
	A0A453RIV4	HATPase_c domain-containing protein. (700 aa)
	A0A453T8D0	HATPase_c domain-containing protein. (719 aa)

Your Current Organism:

Aegilops tauschii

NCBI taxonomy Id: 200361
Other names: A. tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata, Aegilops tauschii subsp. strangulata (Eig) Tzvelev

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A453CPT6	A0A453F309	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A453CPT6	A0A453MXY7	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A453CPT6	A0A453RIV4	Uncharacterized protein.	HATPase_c domain-containing protein.	0.996
A0A453CPT6	A0A453T8D0	Uncharacterized protein.	HATPase_c domain-containing protein.	0.988
A0A453F309	A0A453CPT6	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A453F309	A0A453MXY7	Uncharacterized protein.	Uncharacterized protein.	0.852
A0A453F309	A0A453RIV4	Uncharacterized protein.	HATPase_c domain-containing protein.	0.994
A0A453F309	A0A453T8D0	Uncharacterized protein.	HATPase_c domain-containing protein.	0.997
A0A453MXY7	A0A453CPT6	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A453MXY7	A0A453F309	Uncharacterized protein.	Uncharacterized protein.	0.852
A0A453MXY7	A0A453RIV4	Uncharacterized protein.	HATPase_c domain-containing protein.	0.994
A0A453MXY7	A0A453T8D0	Uncharacterized protein.	HATPase_c domain-containing protein.	0.997
A0A453RIV4	A0A453CPT6	HATPase_c domain-containing protein.	Uncharacterized protein.	0.996
A0A453RIV4	A0A453F309	HATPase_c domain-containing protein.	Uncharacterized protein.	0.994
A0A453RIV4	A0A453MXY7	HATPase_c domain-containing protein.	Uncharacterized protein.	0.994
A0A453RIV4	A0A453T8D0	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.836
A0A453T8D0	A0A453CPT6	HATPase_c domain-containing protein.	Uncharacterized protein.	0.988
A0A453T8D0	A0A453F309	HATPase_c domain-containing protein.	Uncharacterized protein.	0.997
A0A453T8D0	A0A453MXY7	HATPase_c domain-containing protein.	Uncharacterized protein.	0.997
A0A453T8D0	A0A453RIV4	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.836