(17 nodes) Wnt signaling pathway, and WIF domain network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_00069	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (119 aa)
	X777_00691	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (388 aa)
	X777_13163	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (342 aa)
	X777_13168	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (235 aa)
	X777_13174	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (502 aa)
	X777_14311	Protein wntless. (537 aa)
	DMN91_009799	Protein shifted. (300 aa)
	DMN91_006104	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (369 aa)
	DMN91_000465	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (376 aa)
	X777_11079	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (249 aa)
	X777_09049	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (629 aa)
	X777_05642	Notum-like protein. (595 aa)
	DMN91_009151	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (463 aa)
	X777_05076	Low-density lipoprotein receptor-related protein. (1572 aa)
	X777_03159	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family. (696 aa)
	X777_14916	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family. (577 aa)
	X777_11987	Tyrosine-protein kinase Dnt. (514 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_000465	DMN91_009151	A0A026W292	A0A026WFW5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.947
DMN91_000465	DMN91_009799	A0A026W292	A0A026VZ93	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein shifted.	0.914
DMN91_000465	X777_00069	A0A026W292	A0A026VSA1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.413
DMN91_000465	X777_03159	A0A026W292	A0A026WLQ5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.599
DMN91_000465	X777_05076	A0A026W292	A0A026WGG7	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Low-density lipoprotein receptor-related protein.	0.945
DMN91_000465	X777_05642	A0A026W292	A0A026WEC0	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Notum-like protein.	0.924
DMN91_000465	X777_09049	A0A026W292	A0A026W7Q1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.949
DMN91_000465	X777_11987	A0A026W292	A0A026WYZ9	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Tyrosine-protein kinase Dnt.	0.446
DMN91_000465	X777_14311	A0A026W292	A0A026VZ65	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein wntless.	0.652
DMN91_000465	X777_14916	A0A026W292	A0A026WRU5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.971
DMN91_006104	DMN91_009151	A0A026W0U9	A0A026WFW5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.947
DMN91_006104	DMN91_009799	A0A026W0U9	A0A026VZ93	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein shifted.	0.914
DMN91_006104	X777_03159	A0A026W0U9	A0A026WLQ5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.751
DMN91_006104	X777_05076	A0A026W0U9	A0A026WGG7	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Low-density lipoprotein receptor-related protein.	0.949
DMN91_006104	X777_05642	A0A026W0U9	A0A026WEC0	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Notum-like protein.	0.926
DMN91_006104	X777_09049	A0A026W0U9	A0A026W7Q1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.949
DMN91_006104	X777_11987	A0A026W0U9	A0A026WYZ9	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Tyrosine-protein kinase Dnt.	0.482
DMN91_006104	X777_14311	A0A026W0U9	A0A026VZ65	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein wntless.	0.675
DMN91_006104	X777_14916	A0A026W0U9	A0A026WRU5	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.970
DMN91_009151	DMN91_000465	A0A026WFW5	A0A026W292	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.947