(68 nodes) Transport of Mature mRNA derived from an Intron-Containing Transcript, and Nucleocytoplasmic carrier activity network (Ooceraea biroi)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_012241	Nuclear pore complex protein. (1319 aa)
	DMN91_012495	ATP-dependent RNA helicase WM6. (424 aa)
	DMN91_012410	Nuclear pore complex protein. (1135 aa)
	X777_15262	THO complex subunit 6-like protein. (331 aa)
	X777_12986	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
	X777_13866	Nucleoporin NDC1. (440 aa)
	DMN91_010334	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
	DMN91_012022	mRNA export factor. (355 aa)
	X777_11571	NTF2-related export protein. (148 aa)
	X777_10720	Nucleoporin GLE1. (705 aa)
	DMN91_009816	THO complex subunit 5-like protein. (667 aa)
	X777_12154	Nucleoporin-like protein amo1. (633 aa)
	X777_10798	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (398 aa)
	X777_11237	Regulator of chromosome condensation. (387 aa)
	X777_09949	Uncharacterized protein. (254 aa)
	X777_10484	Nuclear pore complex protein. (1862 aa)
	X777_11165	Ran-specific GTPase-activating protein. (209 aa)
	X777_09878	SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
	X777_09642	Snurportin-1. (334 aa)
	X777_09911	Nuclear pore membrane glycoprotein. (1590 aa)
	DMN91_004947	Importin subunit alpha; Belongs to the importin alpha family. (531 aa)
	X777_06575	Protein ELYS. (2070 aa)
	X777_06580	Nuclear RNA export factor. (298 aa)
	X777_06581	Tap-RNA_bind domain-containing protein. (219 aa)
	DMN91_011930	Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
	X777_06008	Nuclear pore glycoprotein p62. (399 aa)
	DMN91_004741	DEAD-box helicase Dbp80. (482 aa)
	X777_05726	Exportin-2. (966 aa)
	DMN91_010996	Nuclear pore complex protein-like protein. (1413 aa)
	X777_05515	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (297 aa)
	X777_04476	Protein xmas-2. (1647 aa)
	X777_04486	THO complex subunit. (654 aa)
	X777_04355	Uncharacterized protein. (308 aa)
	DMN91_001942	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
	X777_03776	Nuclear pore complex protein. (1569 aa)
	X777_04929	Nucleoprotein TPR. (2267 aa)
	X777_04094	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (318 aa)
	X777_04247	Nuclear RNA export factor. (708 aa)
	X777_04843	Importin subunit beta-1. (869 aa)
	DMN91_008118	Exportin-1. (1065 aa)
	X777_04354	Zinc finger CCCH domain-containing protein 11A. (205 aa)
	X777_02711	Putative nucleoporin Nup54. (691 aa)
	DMN91_002662	RNA and export factor-binding protein. (249 aa)
	DMN91_003321	THO complex subunit 7-like protein. (203 aa)
	X777_03148	Leukocyte receptor cluster member. (264 aa)
	DMN91_002981	Putative nucleoporin Nup58. (490 aa)
	DMN91_011854	Nuclear pore complex protein Nup98-Nup96. (1922 aa)
	X777_01063	Nucleoporin-like protein. (1872 aa)
	X777_14695	Polymerase delta-interacting protein. (304 aa)
	X777_01208	E3 SUMO-protein ligase RanBP2. (2666 aa)
	DMN91_008762	Nuclear pore protein. (827 aa)
	X777_15021	Nuclear pore complex protein Nup88. (753 aa)
	DMN91_011117	Nuclear RNA export factor. (529 aa)
	DMN91_008489	Importin subunit alpha; Belongs to the importin alpha family. (515 aa)
	X777_14908	THO complex subunit. (1403 aa)
	e(y)2	Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
	X777_16136	Sporulation-specific protein. (1972 aa)
	DMN91_012941	Importin-4. (1078 aa)
	DMN91_001074	Importin-5. (1096 aa)
	X777_13531	Uncharacterized protein. (154 aa)
	X777_13982	Ran-binding protein. (422 aa)
	X777_13127	Uncharacterized protein. (1397 aa)
	X777_15326	THO complex subunit. (321 aa)
	X777_07916	Nucleoporin Nup37. (322 aa)
	X777_08181	80 kDa MCM3-associated protein. (366 aa)
	DMN91_004003	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (409 aa)
	DMN91_004226	SAP domain-containing ribonucleoprotein. (250 aa)
	DMN91_003646	Nuclear pore complex protein Nup50. (530 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_001074	DMN91_001942	A0A026WW52	A0A026WHC3	Importin-5.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.877
DMN91_001074	DMN91_002662	A0A026WW52	A0A026WLL2	Importin-5.	RNA and export factor-binding protein.	0.843
DMN91_001074	DMN91_004947	A0A026WW52	A0A026WBC9	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	DMN91_008118	A0A026WW52	A0A026WJN7	Importin-5.	Exportin-1.	0.504
DMN91_001074	DMN91_008489	A0A026WW52	A0A026WUD0	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	DMN91_008762	A0A026WW52	A0A026WRV6	Importin-5.	Nuclear pore protein.	0.452
DMN91_001074	DMN91_011854	A0A026WW52	A0A026WQF6	Importin-5.	Nuclear pore complex protein Nup98-Nup96.	0.504
DMN91_001074	DMN91_011930	A0A026WW52	A0A026WD89	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	DMN91_012022	A0A026WW52	A0A026W1H0	Importin-5.	mRNA export factor.	0.402
DMN91_001074	X777_02711	A0A026WW52	A0A026WLE2	Importin-5.	Putative nucleoporin Nup54.	0.489
DMN91_001074	X777_04843	A0A026WW52	A0A026WJI9	Importin-5.	Importin subunit beta-1.	0.767
DMN91_001074	X777_05726	A0A026WW52	A0A026WED2	Importin-5.	Exportin-2.	0.451
DMN91_001074	X777_06008	A0A026WW52	A0A026WE14	Importin-5.	Nuclear pore glycoprotein p62.	0.474
DMN91_001074	X777_10484	A0A026WW52	A0A026W5F8	Importin-5.	Nuclear pore complex protein.	0.428
DMN91_001074	X777_13127	A0A026WW52	A0A026WXX5	Importin-5.	Uncharacterized protein.	0.504
DMN91_001074	X777_13982	A0A026WW52	A0A026WXI8	Importin-5.	Ran-binding protein.	0.455
DMN91_001074	X777_14695	A0A026WW52	A0A026WRC9	Importin-5.	Polymerase delta-interacting protein.	0.544
DMN91_001942	DMN91_001074	A0A026WHC3	A0A026WW52	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin-5.	0.877
DMN91_001942	DMN91_002981	A0A026WHC3	A0A026WPW3	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Putative nucleoporin Nup58.	0.677
DMN91_001942	DMN91_003646	A0A026WHC3	A0A026X3N7	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Nuclear pore complex protein Nup50.	0.895