(24 nodes) Nuclear Pore Complex (NPC) Disassembly network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_012241	Nuclear pore complex protein. (1319 aa)
	DMN91_012410	Nuclear pore complex protein. (1135 aa)
	X777_12986	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
	X777_13866	Nucleoporin NDC1. (440 aa)
	DMN91_010334	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
	X777_10484	Nuclear pore complex protein. (1862 aa)
	X777_09878	SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
	X777_09911	Nuclear pore membrane glycoprotein. (1590 aa)
	X777_06575	Protein ELYS. (2070 aa)
	X777_06008	Nuclear pore glycoprotein p62. (399 aa)
	DMN91_010996	Nuclear pore complex protein-like protein. (1413 aa)
	X777_03776	Nuclear pore complex protein. (1569 aa)
	X777_04929	Nucleoprotein TPR. (2267 aa)
	X777_04094	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (318 aa)
	X777_02711	Putative nucleoporin Nup54. (691 aa)
	DMN91_002981	Putative nucleoporin Nup58. (490 aa)
	DMN91_011854	Nuclear pore complex protein Nup98-Nup96. (1922 aa)
	X777_01063	Nucleoporin-like protein. (1872 aa)
	DMN91_008762	Nuclear pore protein. (827 aa)
	X777_15021	Nuclear pore complex protein Nup88. (753 aa)
	X777_13127	Uncharacterized protein. (1397 aa)
	X777_07916	Nucleoporin Nup37. (322 aa)
	DMN91_004003	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (409 aa)
	DMN91_003646	Nuclear pore complex protein Nup50. (530 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_002981	DMN91_003646	A0A026WPW3	A0A026X3N7	Putative nucleoporin Nup58.	Nuclear pore complex protein Nup50.	0.639
DMN91_002981	DMN91_004003	A0A026WPW3	A0A026X0Z3	Putative nucleoporin Nup58.	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.	0.916
DMN91_002981	DMN91_008762	A0A026WPW3	A0A026WRV6	Putative nucleoporin Nup58.	Nuclear pore protein.	0.988
DMN91_002981	DMN91_010334	A0A026WPW3	A0A026VZ78	Putative nucleoporin Nup58.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.959
DMN91_002981	DMN91_010996	A0A026WPW3	A0A026WFU0	Putative nucleoporin Nup58.	Nuclear pore complex protein-like protein.	0.866
DMN91_002981	DMN91_011854	A0A026WPW3	A0A026WQF6	Putative nucleoporin Nup58.	Nuclear pore complex protein Nup98-Nup96.	0.614
DMN91_002981	DMN91_012241	A0A026WPW3	A0A026VTC4	Putative nucleoporin Nup58.	Nuclear pore complex protein.	0.928
DMN91_002981	DMN91_012410	A0A026WPW3	A0A026VVE9	Putative nucleoporin Nup58.	Nuclear pore complex protein.	0.968
DMN91_002981	X777_01063	A0A026WPW3	A0A026WQY4	Putative nucleoporin Nup58.	Nucleoporin-like protein.	0.691
DMN91_002981	X777_02711	A0A026WPW3	A0A026WLE2	Putative nucleoporin Nup58.	Putative nucleoporin Nup54.	0.999
DMN91_002981	X777_03776	A0A026WPW3	A0A026WHI1	Putative nucleoporin Nup58.	Nuclear pore complex protein.	0.764
DMN91_002981	X777_04094	A0A026WPW3	A0A026WIM9	Putative nucleoporin Nup58.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.762
DMN91_002981	X777_04929	A0A026WPW3	A0A026WHU1	Putative nucleoporin Nup58.	Nucleoprotein TPR.	0.623
DMN91_002981	X777_06008	A0A026WPW3	A0A026WE14	Putative nucleoporin Nup58.	Nuclear pore glycoprotein p62.	0.995
DMN91_002981	X777_06575	A0A026WPW3	A0A026WCT1	Putative nucleoporin Nup58.	Protein ELYS.	0.878
DMN91_002981	X777_09878	A0A026WPW3	A0A026W6F1	Putative nucleoporin Nup58.	SEC13-like protein; Belongs to the WD repeat SEC13 family.	0.913
DMN91_002981	X777_09911	A0A026WPW3	A0A026W886	Putative nucleoporin Nup58.	Nuclear pore membrane glycoprotein.	0.710
DMN91_002981	X777_10484	A0A026WPW3	A0A026W5F8	Putative nucleoporin Nup58.	Nuclear pore complex protein.	0.917
DMN91_002981	X777_12986	A0A026WPW3	A0A026VXJ3	Putative nucleoporin Nup58.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.958
DMN91_002981	X777_13127	A0A026WPW3	A0A026WXX5	Putative nucleoporin Nup58.	Uncharacterized protein.	0.614