(6 nodes) Nuclear pore outer ring network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_012410	Nuclear pore complex protein. (1135 aa)
	X777_12986	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
	DMN91_010334	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
	X777_09878	SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
	DMN91_010996	Nuclear pore complex protein-like protein. (1413 aa)
	X777_07916	Nucleoporin Nup37. (322 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_010334	DMN91_010996	A0A026VZ78	A0A026WFU0	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein-like protein.	0.999
DMN91_010334	DMN91_012410	A0A026VZ78	A0A026VVE9	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein.	0.999
DMN91_010334	X777_07916	A0A026VZ78	A0A026X0I4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin Nup37.	0.999
DMN91_010334	X777_09878	A0A026VZ78	A0A026W6F1	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	SEC13-like protein; Belongs to the WD repeat SEC13 family.	0.999
DMN91_010334	X777_12986	A0A026VZ78	A0A026VXJ3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
DMN91_010996	DMN91_010334	A0A026WFU0	A0A026VZ78	Nuclear pore complex protein-like protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
DMN91_010996	DMN91_012410	A0A026WFU0	A0A026VVE9	Nuclear pore complex protein-like protein.	Nuclear pore complex protein.	0.997
DMN91_010996	X777_07916	A0A026WFU0	A0A026X0I4	Nuclear pore complex protein-like protein.	Nucleoporin Nup37.	0.985
DMN91_010996	X777_09878	A0A026WFU0	A0A026W6F1	Nuclear pore complex protein-like protein.	SEC13-like protein; Belongs to the WD repeat SEC13 family.	0.999
DMN91_010996	X777_12986	A0A026WFU0	A0A026VXJ3	Nuclear pore complex protein-like protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.995
DMN91_012410	DMN91_010334	A0A026VVE9	A0A026VZ78	Nuclear pore complex protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
DMN91_012410	DMN91_010996	A0A026VVE9	A0A026WFU0	Nuclear pore complex protein.	Nuclear pore complex protein-like protein.	0.997
DMN91_012410	X777_07916	A0A026VVE9	A0A026X0I4	Nuclear pore complex protein.	Nucleoporin Nup37.	0.999
DMN91_012410	X777_09878	A0A026VVE9	A0A026W6F1	Nuclear pore complex protein.	SEC13-like protein; Belongs to the WD repeat SEC13 family.	0.999
DMN91_012410	X777_12986	A0A026VVE9	A0A026VXJ3	Nuclear pore complex protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
X777_07916	DMN91_010334	A0A026X0I4	A0A026VZ78	Nucleoporin Nup37.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
X777_07916	DMN91_010996	A0A026X0I4	A0A026WFU0	Nucleoporin Nup37.	Nuclear pore complex protein-like protein.	0.985
X777_07916	DMN91_012410	A0A026X0I4	A0A026VVE9	Nucleoporin Nup37.	Nuclear pore complex protein.	0.999
X777_07916	X777_09878	A0A026X0I4	A0A026W6F1	Nucleoporin Nup37.	SEC13-like protein; Belongs to the WD repeat SEC13 family.	0.999
X777_07916	X777_12986	A0A026X0I4	A0A026VXJ3	Nucleoporin Nup37.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999