(5 nodes) Structural constituent of nuclear pore network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_10484	Nuclear pore complex protein. (1862 aa)
	X777_06008	Nuclear pore glycoprotein p62. (399 aa)
	X777_02711	Putative nucleoporin Nup54. (691 aa)
	DMN91_002981	Putative nucleoporin Nup58. (490 aa)
	DMN91_008762	Nuclear pore protein. (827 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_002981	DMN91_008762	A0A026WPW3	A0A026WRV6	Putative nucleoporin Nup58.	Nuclear pore protein.	0.988
DMN91_002981	X777_02711	A0A026WPW3	A0A026WLE2	Putative nucleoporin Nup58.	Putative nucleoporin Nup54.	0.999
DMN91_002981	X777_06008	A0A026WPW3	A0A026WE14	Putative nucleoporin Nup58.	Nuclear pore glycoprotein p62.	0.995
DMN91_002981	X777_10484	A0A026WPW3	A0A026W5F8	Putative nucleoporin Nup58.	Nuclear pore complex protein.	0.917
DMN91_008762	DMN91_002981	A0A026WRV6	A0A026WPW3	Nuclear pore protein.	Putative nucleoporin Nup58.	0.988
DMN91_008762	X777_02711	A0A026WRV6	A0A026WLE2	Nuclear pore protein.	Putative nucleoporin Nup54.	0.999
DMN91_008762	X777_06008	A0A026WRV6	A0A026WE14	Nuclear pore protein.	Nuclear pore glycoprotein p62.	0.999
DMN91_008762	X777_10484	A0A026WRV6	A0A026W5F8	Nuclear pore protein.	Nuclear pore complex protein.	0.999
X777_02711	DMN91_002981	A0A026WLE2	A0A026WPW3	Putative nucleoporin Nup54.	Putative nucleoporin Nup58.	0.999
X777_02711	DMN91_008762	A0A026WLE2	A0A026WRV6	Putative nucleoporin Nup54.	Nuclear pore protein.	0.999
X777_02711	X777_06008	A0A026WLE2	A0A026WE14	Putative nucleoporin Nup54.	Nuclear pore glycoprotein p62.	0.999
X777_02711	X777_10484	A0A026WLE2	A0A026W5F8	Putative nucleoporin Nup54.	Nuclear pore complex protein.	0.999
X777_06008	DMN91_002981	A0A026WE14	A0A026WPW3	Nuclear pore glycoprotein p62.	Putative nucleoporin Nup58.	0.995
X777_06008	DMN91_008762	A0A026WE14	A0A026WRV6	Nuclear pore glycoprotein p62.	Nuclear pore protein.	0.999
X777_06008	X777_02711	A0A026WE14	A0A026WLE2	Nuclear pore glycoprotein p62.	Putative nucleoporin Nup54.	0.999
X777_06008	X777_10484	A0A026WE14	A0A026W5F8	Nuclear pore glycoprotein p62.	Nuclear pore complex protein.	0.999
X777_10484	DMN91_002981	A0A026W5F8	A0A026WPW3	Nuclear pore complex protein.	Putative nucleoporin Nup58.	0.917
X777_10484	DMN91_008762	A0A026W5F8	A0A026WRV6	Nuclear pore complex protein.	Nuclear pore protein.	0.999
X777_10484	X777_02711	A0A026W5F8	A0A026WLE2	Nuclear pore complex protein.	Putative nucleoporin Nup54.	0.999
X777_10484	X777_06008	A0A026W5F8	A0A026WE14	Nuclear pore complex protein.	Nuclear pore glycoprotein p62.	0.999