STRINGSTRING
X777_02377 X777_02377 X777_00270 X777_00270 X777_00269 X777_00269 DMN91_002264 DMN91_002264 X777_13691 X777_13691 DMN91_001910 DMN91_001910 DMN91_010162 DMN91_010162 DMN91_006203 DMN91_006203 DMN91_003947 DMN91_003947 X777_07677 X777_07677 DMN91_007729 DMN91_007729 DMN91_001989 DMN91_001989 DMN91_010136 DMN91_010136 DMN91_008452 DMN91_008452
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X777_02377Putative histone-binding protein Caf1. (391 aa)
X777_00270Histone H2A; Belongs to the histone H2A family. (124 aa)
X777_00269Histone H2B; Belongs to the histone H2B family. (123 aa)
DMN91_002264Histone H3; Belongs to the histone H3 family. (136 aa)
X777_13691Lysine-specific demethylase. (904 aa)
DMN91_001910Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DMN91_010162Histone H3-like centromeric protein cse-4. (135 aa)
DMN91_006203Histone H3; Belongs to the histone H3 family. (136 aa)
DMN91_003947Histone acetyltransferase type B catalytic subunit. (417 aa)
X777_07677Chromodomain Y-like protein. (226 aa)
DMN91_007729Histone H2B; Belongs to the histone H2B family. (123 aa)
DMN91_001989Histone H2A; Belongs to the histone H2A family. (124 aa)
DMN91_010136Histone-lysine N-methyltransferase SETD2. (1833 aa)
DMN91_008452Protein HGV2. (452 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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