STRINGSTRING
DMN91_004582 DMN91_004582 X777_08234 X777_08234 X777_08347 X777_08347 X777_08349 X777_08349 X777_09337 X777_09337 X777_07359 X777_07359 X777_12070 X777_12070 X777_10136 X777_10136 X777_04616 X777_04616 X777_10240 X777_10240 X777_00232 X777_00232 DMN91_005378 DMN91_005378 DMN91_004693 DMN91_004693 X777_16635 X777_16635 X777_15141 X777_15141 DMN91_004844 DMN91_004844 X777_14446 X777_14446 X777_15640 X777_15640 X777_14420 X777_14420 X777_12312 X777_12312 X777_11764 X777_11764 X777_11663 X777_11663 X777_12336 X777_12336 X777_11525 X777_11525 X777_11156 X777_11156 X777_11208 X777_11208 DMN91_009708 DMN91_009708 DMN91_006481 DMN91_006481 DMN91_000771 DMN91_000771 X777_10866 X777_10866 X777_10188 X777_10188 X777_10071 X777_10071 X777_10232 X777_10232 DMN91_006226 DMN91_006226 X777_10057 X777_10057 X777_03389 X777_03389 DMN91_004118 DMN91_004118 X777_08346 X777_08346 X777_11427 X777_11427 X777_11703 X777_11703 DMN91_003120 DMN91_003120 X777_09882 X777_09882 X777_10816 X777_10816 DMN91_000752 DMN91_000752 DMN91_002776 DMN91_002776 X777_09803 X777_09803 X777_10477 X777_10477 DMN91_006978 DMN91_006978 X777_09210 X777_09210 X777_09061 X777_09061 X777_09095 X777_09095 DMN91_004401 DMN91_004401 X777_08910 X777_08910 X777_09005 X777_09005 X777_09703 X777_09703 X777_09843 X777_09843 X777_07039 X777_07039 DMN91_002047 DMN91_002047 X777_07165 X777_07165 X777_07661 X777_07661 DMN91_006841 DMN91_006841 X777_07163 X777_07163 X777_06979 X777_06979 X777_06539 X777_06539 DMN91_004666 DMN91_004666 DMN91_004902 DMN91_004902 X777_06795 X777_06795 X777_06618 X777_06618 DMN91_010165 DMN91_010165 X777_07171 X777_07171 X777_06000 X777_06000 DMN91_009942 DMN91_009942 DMN91_005224 DMN91_005224 X777_04897 X777_04897 X777_05072 X777_05072 DMN91_008964 DMN91_008964 DMN91_007321 DMN91_007321 DMN91_006874 DMN91_006874 X777_05345 X777_05345 X777_06622 X777_06622 X777_04415 X777_04415 X777_05355 X777_05355 DMN91_007101 DMN91_007101 DMN91_004672 DMN91_004672 DMN91_009326 DMN91_009326 DMN91_007360 DMN91_007360 DMN91_001691 DMN91_001691 DMN91_008847 DMN91_008847 X777_03657 X777_03657 DMN91_011108 DMN91_011108 X777_03583 X777_03583 X777_03527 X777_03527 DMN91_009993 DMN91_009993 X777_03616 X777_03616 DMN91_010300 DMN91_010300 X777_03582 X777_03582 X777_13558 X777_13558 X777_03109 X777_03109 X777_02666 X777_02666 DMN91_010220 DMN91_010220 X777_02718 X777_02718 X777_02654 X777_02654 X777_01743 X777_01743 X777_02358 X777_02358 X777_02752 X777_02752 X777_02107 X777_02107 X777_03282 X777_03282 DMN91_003070 DMN91_003070 X777_02665 X777_02665 X777_02459 X777_02459 DMN91_003319 DMN91_003319 X777_02060 X777_02060 X777_01408 X777_01408 X777_01413 X777_01413 X777_01765 X777_01765 DMN91_006307 DMN91_006307 DMN91_012112 DMN91_012112 DMN91_010488 DMN91_010488 DMN91_009226 DMN91_009226 DMN91_006341 DMN91_006341 DMN91_008408 DMN91_008408 X777_15967 X777_15967 DMN91_008090 DMN91_008090 DMN91_010520 DMN91_010520 X777_00395 X777_00395 DMN91_008082 DMN91_008082 DMN91_002298 DMN91_002298 DMN91_011241 DMN91_011241 e(y)2 e(y)2 X777_15730 X777_15730 DMN91_009676 DMN91_009676 X777_15892 X777_15892 X777_13414 X777_13414 X777_13474 X777_13474 DMN91_010284 DMN91_010284 X777_13477 X777_13477 X777_13585 X777_13585 DMN91_007725 DMN91_007725 DMN91_009961 DMN91_009961 X777_08338 X777_08338 X777_08343 X777_08343 X777_14434 X777_14434 DMN91_004814 DMN91_004814 X777_08363 X777_08363
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMN91_004582DNA-directed RNA polymerase II subunit RPB3. (276 aa)
X777_08234DNA-directed RNA polymerase III subunit RPC4. (383 aa)
X777_08347Uncharacterized protein. (104 aa)
X777_08349Dachshund-like protein. (257 aa)
X777_09337Cyclin-T; Belongs to the cyclin family. (1472 aa)
X777_07359Lin-9-like protein. (545 aa)
X777_12070DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1452 aa)
X777_10136General transcription factor IIH subunit. (294 aa)
X777_04616DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1383 aa)
X777_10240Coiled-coil domain-containing protein. (207 aa)
X777_00232DNA-directed RNA polymerase II 16 kDa polypeptide. (140 aa)
DMN91_005378General transcription factor 3C polypeptide. (605 aa)
DMN91_004693RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (508 aa)
X777_16635Uncharacterized protein. (338 aa)
X777_15141DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1116 aa)
DMN91_004844CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (321 aa)
X777_14446Uncharacterized protein. (316 aa)
X777_15640DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1129 aa)
X777_14420Mab-21 domain-containing protein. (269 aa)
X777_12312Solute carrier family 25 member 36-A; Belongs to the mitochondrial carrier (TC 2.A.29) family. (373 aa)
X777_11764DNA-directed RNA polymerase II subunit RPB9. (67 aa)
X777_11663Uncharacterized protein. (696 aa)
X777_12336RNA polymerase II subunit B1 CTD phosphatase Rpap2. (649 aa)
X777_11525DNA-directed RNA polymerase I subunit RPA43. (379 aa)
X777_11156TFIIH basal transcription factor complex helicase XPD subunit. (756 aa)
X777_11208Putative DNA-directed RNA polymerases I and III subunit RPAC2. (106 aa)
DMN91_009708DNA-directed RNA polymerase III subunit RPC9. (127 aa)
DMN91_006481Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
DMN91_000771DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
X777_10866DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1139 aa)
X777_10188Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1764 aa)
X777_10071Transcription initiation factor TFIID subunit. (1201 aa)
X777_10232FACT complex subunit spt16. (1132 aa)
DMN91_006226General transcription factor IIH subunit. (401 aa)
X777_10057Cyclin-dependent kinase. (1350 aa)
X777_03389TAF domain-containing protein. (523 aa)
DMN91_004118Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (82 aa)
X777_08346Uncharacterized protein. (94 aa)
X777_11427Dr1-associated corepressor. (222 aa)
X777_11703DNA-directed RNA polymerase II subunit RPB7. (293 aa)
DMN91_003120PIH1 domain-containing protein. (314 aa)
X777_09882DNA-directed RNA polymerases I, II, and III subunit RPABC3. (167 aa)
X777_10816Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (338 aa)
DMN91_000752TATA-box-binding protein. (241 aa)
DMN91_002776Transcription elongation factor B polypeptide; Belongs to the SKP1 family. (145 aa)
X777_09803CCHC-type domain-containing protein. (512 aa)
X777_10477DNA-directed RNA polymerase I subunit RPA43. (168 aa)
DMN91_006978rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (450 aa)
X777_09210DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (215 aa)
X777_09061snRNA-activating protein complex subunit. (327 aa)
X777_09095Pre-mRNA cleavage complex 2 protein Pcf11. (1894 aa)
DMN91_004401General transcription factor IIH subunit. (559 aa)
X777_08910Transcription initiation factor TFIID subunit. (630 aa)
X777_09005Cyclin-H; Belongs to the cyclin family. (494 aa)
X777_09703Transcription initiation factor IIA subunit. (355 aa)
X777_09843DNA excision repair protein ERCC-6. (1073 aa)
X777_07039Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (111 aa)
DMN91_002047Transcription elongation factor SPT5. (1110 aa)
X777_07165RNA polymerase II-associated factor 1-like protein. (380 aa)
X777_07661DUF1758 domain-containing protein. (562 aa)
DMN91_006841rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (348 aa)
X777_07163RNA polymerase II-associated factor 1-like protein. (535 aa)
X777_06979Protein SCAI. (535 aa)
X777_06539DUF2236 domain-containing protein. (284 aa)
DMN91_004666DNA-directed RNA polymerase II subunit RPB11. (117 aa)
DMN91_004902General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
X777_06795Uncharacterized protein. (104 aa)
X777_06618DNA-directed RNA polymerases I and III subunit RPAC1. (348 aa)
DMN91_010165Transcription factor TFIIIB component B''-like protein. (773 aa)
X777_07171General transcription factor 3C polypeptide. (1047 aa)
X777_06000Transcription initiation factor TFIID subunit. (118 aa)
DMN91_009942DNA-directed RNA polymerase I subunit RPA49. (384 aa)
DMN91_005224RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (195 aa)
X777_04897DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1159 aa)
X777_05072DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (111 aa)
DMN91_008964DNA-directed RNA polymerase III subunit RPC8. (205 aa)
DMN91_007321snRNA-activating protein complex subunit. (313 aa)
DMN91_006874DNA-directed RNA polymerase III subunit RPC5. (504 aa)
X777_05345DNA excision repair protein haywire. (794 aa)
X777_06622DNA-directed RNA polymerase II subunit RPB9. (52 aa)
X777_04415Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
X777_05355DUF1758 domain-containing protein. (504 aa)
DMN91_007101Transcription initiation factor TFIID subunit. (246 aa)
DMN91_004672CCR4-NOT transcription complex subunit. (300 aa)
DMN91_009326Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (310 aa)
DMN91_007360Transcription initiation factor TFIID subunit. (640 aa)
DMN91_001691Transcription elongation factor S-II. (312 aa)
DMN91_008847Transcription initiation factor TFIID subunit. (985 aa)
X777_03657DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
DMN91_011108Uncharacterized protein. (509 aa)
X777_03583DUF2236 domain-containing protein. (264 aa)
X777_03527RNA-binding protein pno1. (2460 aa)
DMN91_009993TATA box-binding protein-like protein. (295 aa)
X777_03616Death-inducer obliterator. (2259 aa)
DMN91_010300General transcription factor 3C polypeptide. (196 aa)
X777_03582DUF2236 domain-containing protein. (338 aa)
X777_13558ETS-like proteinous factor. (297 aa)
X777_03109Transcription initiation factor IIB. (315 aa)
X777_02666Uncharacterized protein. (246 aa)
DMN91_010220General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (272 aa)
X777_02718Transcription elongation factor SPT4. (75 aa)
X777_02654DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1707 aa)
X777_01743Transcription initiation factor TFIID subunit. (296 aa)
X777_02358ETS translocation variant. (1065 aa)
X777_02752DUF2236 domain-containing protein. (379 aa)
X777_02107RNA polymerase I-specific transcription initiation factor RRN3. (545 aa)
X777_03282snRNA-activating protein complex subunit. (932 aa)
DMN91_003070Uncharacterized protein. (739 aa)
X777_02665DUF2236 domain-containing protein. (388 aa)
X777_02459DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
DMN91_003319Putative helicase senataxin. (1801 aa)
X777_02060B-box type zinc finger protein ncl-1. (778 aa)
X777_01408Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1756 aa)
X777_01413Transcription initiation factor TFIID subunit. (381 aa)
X777_01765General transcription factor IIH subunit. (58 aa)
DMN91_006307Transcription elongation factor B polypeptide. (734 aa)
DMN91_012112Protein Dr1. (167 aa)
DMN91_010488Uncharacterized protein. (1777 aa)
DMN91_009226YEATS domain-containing protein. (227 aa)
DMN91_006341General transcription factor 3C polypeptide. (920 aa)
DMN91_008408General transcription factor IIE subunit. (420 aa)
X777_15967L-asparaginase. (1283 aa)
DMN91_008090DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
DMN91_010520TATA-box-binding protein. (306 aa)
X777_00395DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (306 aa)
DMN91_008082DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1103 aa)
DMN91_002298Transcription initiation protein SPT3-like protein. (310 aa)
DMN91_011241Protein SCAF8. (1604 aa)
e(y)2Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
X777_15730RNA polymerase II-associated protein. (1248 aa)
DMN91_009676Protein ENL. (740 aa)
X777_15892Transcription initiation factor TFIID subunit. (243 aa)
X777_13414RNA polymerase II elongation factor ELL. (650 aa)
X777_13474Transcription initiation factor TFIID subunit. (1900 aa)
DMN91_010284DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
X777_13477DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1901 aa)
X777_13585Transcription factor IIIB 90 kDa subunit. (666 aa)
DMN91_007725Transcription initiation factor TFIID subunit. (125 aa)
DMN91_009961Transcription initiation factor TFIID subunit. (194 aa)
X777_08338Dachshund-like protein. (205 aa)
X777_08343Uncharacterized protein. (67 aa)
X777_14434DUF1758 domain-containing protein. (514 aa)
DMN91_004814Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (381 aa)
X777_08363Transcription elongation factor B polypeptide. (123 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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