3 items (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_010838	Inner centromere protein B. (869 aa)
	X777_08897	Mitotic checkpoint serine/threonine-protein kinase BUB1. (1446 aa)
	DMN91_010319	Borealin. (297 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_010319	DMN91_010838	A0A026WK79	A0A026WS55	Borealin.	Inner centromere protein B.	0.995
DMN91_010319	X777_08897	A0A026WK79	A0A026W7Z7	Borealin.	Mitotic checkpoint serine/threonine-protein kinase BUB1.	0.909
DMN91_010838	DMN91_010319	A0A026WS55	A0A026WK79	Inner centromere protein B.	Borealin.	0.995
DMN91_010838	X777_08897	A0A026WS55	A0A026W7Z7	Inner centromere protein B.	Mitotic checkpoint serine/threonine-protein kinase BUB1.	0.865
X777_08897	DMN91_010319	A0A026W7Z7	A0A026WK79	Mitotic checkpoint serine/threonine-protein kinase BUB1.	Borealin.	0.909
X777_08897	DMN91_010838	A0A026W7Z7	A0A026WS55	Mitotic checkpoint serine/threonine-protein kinase BUB1.	Inner centromere protein B.	0.865