STRINGSTRING
DMN91_002614 DMN91_002614 X777_00119 X777_00119 DMN91_001357 DMN91_001357 X777_12449 X777_12449 DMN91_004995 DMN91_004995 DMN91_001351 DMN91_001351 X777_02753 X777_02753 X777_01238 X777_01238 X777_16932 X777_16932 DMN91_005430 DMN91_005430 DMN91_011269 DMN91_011269 DMN91_009557 DMN91_009557
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMN91_002614Ubiquitin-60S ribosomal protein L40. (128 aa)
X777_00119Ubiquitin-related modifier 1; Belongs to the URM1 family. (61 aa)
DMN91_001357Polyubiquitin-A. (458 aa)
X777_12449Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (152 aa)
DMN91_004995Ubiquitin-like protein. (73 aa)
DMN91_001351Gamma-glutamylcyclotransferase. (176 aa)
X777_02753Small ubiquitin-related modifier. (59 aa)
X777_01238Polyubiquitin-A. (839 aa)
X777_16932NEDD8. (35 aa)
DMN91_005430Gamma-aminobutyric acid receptor-associated protein. (117 aa)
DMN91_011269Small ubiquitin-related modifier. (92 aa)
DMN91_009557Ubiquitin-40S ribosomal protein S27a. (156 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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