(54 nodes) Protein localization to nucleus network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_14434	DUF1758 domain-containing protein. (514 aa)
	X777_09343	Uncharacterized protein. (153 aa)
	DMN91_006562	Importin-9. (1031 aa)
	DMN91_003646	Nuclear pore complex protein Nup50. (530 aa)
	DMN91_012241	Nuclear pore complex protein. (1319 aa)
	DMN91_012410	Nuclear pore complex protein. (1135 aa)
	X777_12986	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
	DMN91_004913	Putative RNA-binding protein. (383 aa)
	DMN91_010334	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
	DMN91_006109	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (273 aa)
	X777_11571	NTF2-related export protein. (148 aa)
	X777_11569	Importin-7. (1062 aa)
	X777_10548	STAGA complex 65 subunit gamma. (325 aa)
	X777_10595	Homeobox protein homothorax. (395 aa)
	DMN91_003302	Transportin-3. (956 aa)
	X777_11237	Regulator of chromosome condensation. (387 aa)
	X777_09803	CCHC-type domain-containing protein. (512 aa)
	X777_09878	SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
	DMN91_007494	Lamin-C; Belongs to the intermediate filament family. (619 aa)
	X777_09911	Nuclear pore membrane glycoprotein. (1590 aa)
	X777_07661	DUF1758 domain-containing protein. (562 aa)
	DMN91_004947	Importin subunit alpha; Belongs to the importin alpha family. (531 aa)
	X777_07282	Inhibitor of growth protein. (305 aa)
	DMN91_011930	Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
	X777_06008	Nuclear pore glycoprotein p62. (399 aa)
	X777_05726	Exportin-2. (966 aa)
	DMN91_010996	Nuclear pore complex protein-like protein. (1413 aa)
	X777_05355	DUF1758 domain-containing protein. (504 aa)
	DMN91_001942	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
	X777_03776	Nuclear pore complex protein. (1569 aa)
	X777_04929	Nucleoprotein TPR. (2267 aa)
	X777_04094	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (318 aa)
	X777_04843	Importin subunit beta-1. (869 aa)
	X777_02711	Putative nucleoporin Nup54. (691 aa)
	DMN91_006899	Maternal effect protein oskar. (397 aa)
	DMN91_008682	Importin-13. (923 aa)
	X777_03168	Poly [ADP-ribose] polymerase. (986 aa)
	DMN91_003300	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (392 aa)
	DMN91_011854	Nuclear pore complex protein Nup98-Nup96. (1922 aa)
	X777_01063	Nucleoporin-like protein. (1872 aa)
	X777_14690	Putative nuclear transport factor. (170 aa)
	X777_01208	E3 SUMO-protein ligase RanBP2. (2666 aa)
	DMN91_008762	Nuclear pore protein. (827 aa)
	X777_15021	Nuclear pore complex protein Nup88. (753 aa)
	X777_00368	OPI10-like protein. (195 aa)
	DMN91_008489	Importin subunit alpha; Belongs to the importin alpha family. (515 aa)
	DMN91_010794	Rapamycin-insensitive companion of mTOR. (1541 aa)
	DMN91_012941	Importin-4. (1078 aa)
	DMN91_008387	RPA-interacting protein. (222 aa)
	DMN91_001074	Importin-5. (1096 aa)
	X777_13596	Telomerase Cajal body protein. (148 aa)
	X777_14281	Transportin-1. (1408 aa)
	X777_13077	Importin-11. (973 aa)
	X777_13127	Uncharacterized protein. (1397 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_001074	DMN91_001942	A0A026WW52	A0A026WHC3	Importin-5.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.877
DMN91_001074	DMN91_003302	A0A026WW52	A0A026W543	Importin-5.	Transportin-3.	0.448
DMN91_001074	DMN91_004947	A0A026WW52	A0A026WBC9	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	DMN91_006562	A0A026WW52	A0A026X0K4	Importin-5.	Importin-9.	0.519
DMN91_001074	DMN91_008489	A0A026WW52	A0A026WUD0	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	DMN91_008682	A0A026WW52	A0A026WP00	Importin-5.	Importin-13.	0.479
DMN91_001074	DMN91_008762	A0A026WW52	A0A026WRV6	Importin-5.	Nuclear pore protein.	0.452
DMN91_001074	DMN91_011854	A0A026WW52	A0A026WQF6	Importin-5.	Nuclear pore complex protein Nup98-Nup96.	0.504
DMN91_001074	DMN91_011930	A0A026WW52	A0A026WD89	Importin-5.	Importin subunit alpha; Belongs to the importin alpha family.	0.437
DMN91_001074	X777_02711	A0A026WW52	A0A026WLE2	Importin-5.	Putative nucleoporin Nup54.	0.489
DMN91_001074	X777_04843	A0A026WW52	A0A026WJI9	Importin-5.	Importin subunit beta-1.	0.767
DMN91_001074	X777_05726	A0A026WW52	A0A026WED2	Importin-5.	Exportin-2.	0.451
DMN91_001074	X777_06008	A0A026WW52	A0A026WE14	Importin-5.	Nuclear pore glycoprotein p62.	0.474
DMN91_001074	X777_11569	A0A026WW52	A0A026W3G3	Importin-5.	Importin-7.	0.665
DMN91_001074	X777_13077	A0A026WW52	A0A026WXS8	Importin-5.	Importin-11.	0.402
DMN91_001074	X777_13127	A0A026WW52	A0A026WXX5	Importin-5.	Uncharacterized protein.	0.504
DMN91_001074	X777_14281	A0A026WW52	A0A026WX95	Importin-5.	Transportin-1.	0.730
DMN91_001942	DMN91_001074	A0A026WHC3	A0A026WW52	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin-5.	0.877
DMN91_001942	DMN91_003302	A0A026WHC3	A0A026W543	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Transportin-3.	0.882
DMN91_001942	DMN91_003646	A0A026WHC3	A0A026X3N7	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Nuclear pore complex protein Nup50.	0.895