(7 nodes) Nuclear pore central transport channel network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_02711	Putative nucleoporin Nup54. (691 aa)
	X777_14690	Putative nuclear transport factor. (170 aa)
	DMN91_011854	Nuclear pore complex protein Nup98-Nup96. (1922 aa)
	X777_11571	NTF2-related export protein. (148 aa)
	X777_06008	Nuclear pore glycoprotein p62. (399 aa)
	X777_03776	Nuclear pore complex protein. (1569 aa)
	X777_04094	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (318 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_011854	X777_02711	A0A026WQF6	A0A026WLE2	Nuclear pore complex protein Nup98-Nup96.	Putative nucleoporin Nup54.	0.972
DMN91_011854	X777_03776	A0A026WQF6	A0A026WHI1	Nuclear pore complex protein Nup98-Nup96.	Nuclear pore complex protein.	0.956
DMN91_011854	X777_04094	A0A026WQF6	A0A026WIM9	Nuclear pore complex protein Nup98-Nup96.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.982
DMN91_011854	X777_06008	A0A026WQF6	A0A026WE14	Nuclear pore complex protein Nup98-Nup96.	Nuclear pore glycoprotein p62.	0.966
DMN91_011854	X777_11571	A0A026WQF6	A0A026W2A5	Nuclear pore complex protein Nup98-Nup96.	NTF2-related export protein.	0.726
DMN91_011854	X777_14690	A0A026WQF6	A0A026WRC3	Nuclear pore complex protein Nup98-Nup96.	Putative nuclear transport factor.	0.466
X777_02711	DMN91_011854	A0A026WLE2	A0A026WQF6	Putative nucleoporin Nup54.	Nuclear pore complex protein Nup98-Nup96.	0.972
X777_02711	X777_03776	A0A026WLE2	A0A026WHI1	Putative nucleoporin Nup54.	Nuclear pore complex protein.	0.975
X777_02711	X777_04094	A0A026WLE2	A0A026WIM9	Putative nucleoporin Nup54.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.967
X777_02711	X777_06008	A0A026WLE2	A0A026WE14	Putative nucleoporin Nup54.	Nuclear pore glycoprotein p62.	0.999
X777_02711	X777_11571	A0A026WLE2	A0A026W2A5	Putative nucleoporin Nup54.	NTF2-related export protein.	0.669
X777_02711	X777_14690	A0A026WLE2	A0A026WRC3	Putative nucleoporin Nup54.	Putative nuclear transport factor.	0.541
X777_03776	DMN91_011854	A0A026WHI1	A0A026WQF6	Nuclear pore complex protein.	Nuclear pore complex protein Nup98-Nup96.	0.956
X777_03776	X777_02711	A0A026WHI1	A0A026WLE2	Nuclear pore complex protein.	Putative nucleoporin Nup54.	0.975
X777_03776	X777_04094	A0A026WHI1	A0A026WIM9	Nuclear pore complex protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.923
X777_03776	X777_06008	A0A026WHI1	A0A026WE14	Nuclear pore complex protein.	Nuclear pore glycoprotein p62.	0.926
X777_03776	X777_11571	A0A026WHI1	A0A026W2A5	Nuclear pore complex protein.	NTF2-related export protein.	0.595
X777_03776	X777_14690	A0A026WHI1	A0A026WRC3	Nuclear pore complex protein.	Putative nuclear transport factor.	0.620
X777_04094	DMN91_011854	A0A026WIM9	A0A026WQF6	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	Nuclear pore complex protein Nup98-Nup96.	0.982
X777_04094	X777_02711	A0A026WIM9	A0A026WLE2	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	Putative nucleoporin Nup54.	0.967