(51 nodes) Nuclear membrane network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_001094	Uncharacterized protein. (359 aa)
	DMN91_011896	Uncharacterized protein. (135 aa)
	DMN91_000701	Transmembrane channel-like protein. (710 aa)
	DMN91_003735	Lamin-B receptor. (660 aa)
	X777_12986	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
	X777_13866	Nucleoporin NDC1. (440 aa)
	X777_13653	Uncharacterized protein. (1281 aa)
	DMN91_010334	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
	X777_11859	EF-hand domain-containing protein. (460 aa)
	X777_11383	Uncharacterized protein. (186 aa)
	DMN91_006311	Unc-50-like protein. (267 aa)
	DMN91_007675	Trehalase. (578 aa)
	X777_07922	Sentrin-specific protease. (580 aa)
	X777_07867	Protein dumpy-19. (638 aa)
	DMN91_003554	Glycolipid transfer protein domain-containing protein. (211 aa)
	DMN91_003557	Uncharacterized protein. (351 aa)
	X777_07803	Uncharacterized protein. (130 aa)
	X777_13127	Uncharacterized protein. (1397 aa)
	X777_00394	Uncharacterized protein. (338 aa)
	X777_01067	Ankyrin-2. (2952 aa)
	X777_01415	Macoilin. (736 aa)
	X777_01069	Ankyrin-2. (561 aa)
	X777_14740	DUF4205 domain-containing protein. (419 aa)
	X777_01365	14-3-3 protein zeta; Belongs to the 14-3-3 family. (309 aa)
	X777_01070	Lysine-specific demethylase. (415 aa)
	DMN91_011854	Nuclear pore complex protein Nup98-Nup96. (1922 aa)
	X777_00815	LAG1 longevity assurance-like protein. (376 aa)
	X777_02152	Glycine receptor subunit alpha-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (365 aa)
	X777_02707	Uncharacterized protein. (1027 aa)
	X777_01679	A-kinase anchor protein. (1578 aa)
	DMN91_002662	RNA and export factor-binding protein. (249 aa)
	X777_02708	Uncharacterized protein. (210 aa)
	X777_04078	Uncharacterized protein. (213 aa)
	DMN91_008118	Exportin-1. (1065 aa)
	X777_04247	Nuclear RNA export factor. (708 aa)
	X777_04077	Uncharacterized protein. (62 aa)
	X777_04076	Ankyrin repeat domain-containing protein. (216 aa)
	X777_05079	Uncharacterized protein. (407 aa)
	X777_05797	Nesprin-1. (7858 aa)
	DMN91_007152	Ima1_N domain-containing protein. (620 aa)
	X777_06445	Uncharacterized protein. (156 aa)
	DMN91_004851	Uncharacterized protein. (403 aa)
	DMN91_002735	NAD-dependent deacetylase sirtuin-1. (828 aa)
	X777_05795	Nesprin-1. (1120 aa)
	X777_06412	Prostaglandin E synthase. (166 aa)
	DMN91_002550	Nurim-like protein. (243 aa)
	X777_10561	Sterol regulatory element-binding protein. (1012 aa)
	X777_10934	Uncharacterized protein. (222 aa)
	X777_10936	Uncharacterized protein. (198 aa)
	DMN91_005795	Inner nuclear membrane protein Man1. (823 aa)
	X777_11203	Phosphatidylinositol transfer protein alpha isoform. (265 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_002662	DMN91_010334	A0A026WLL2	A0A026VZ78	RNA and export factor-binding protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.673
DMN91_002662	DMN91_011854	A0A026WLL2	A0A026WQF6	RNA and export factor-binding protein.	Nuclear pore complex protein Nup98-Nup96.	0.704
DMN91_002662	X777_04247	A0A026WLL2	A0A026WJ15	RNA and export factor-binding protein.	Nuclear RNA export factor.	0.985
DMN91_002662	X777_12986	A0A026WLL2	A0A026VXJ3	RNA and export factor-binding protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.684
DMN91_002662	X777_13127	A0A026WLL2	A0A026WXX5	RNA and export factor-binding protein.	Uncharacterized protein.	0.556
DMN91_002735	X777_10561	A0A026WDM5	A0A026W4I3	NAD-dependent deacetylase sirtuin-1.	Sterol regulatory element-binding protein.	0.552
DMN91_003735	DMN91_005795	A0A026VWA1	A0A026W3C0	Lamin-B receptor.	Inner nuclear membrane protein Man1.	0.674
DMN91_005795	DMN91_003735	A0A026W3C0	A0A026VWA1	Inner nuclear membrane protein Man1.	Lamin-B receptor.	0.674
DMN91_007675	X777_01365	A0A026X326	A0A026WR11	Trehalase.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.439
DMN91_008118	DMN91_010334	A0A026WJN7	A0A026VZ78	Exportin-1.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.401
DMN91_008118	DMN91_011854	A0A026WJN7	A0A026WQF6	Exportin-1.	Nuclear pore complex protein Nup98-Nup96.	0.778
DMN91_008118	X777_01365	A0A026WJN7	A0A026WR11	Exportin-1.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.621
DMN91_008118	X777_04247	A0A026WJN7	A0A026WJ15	Exportin-1.	Nuclear RNA export factor.	0.493
DMN91_008118	X777_13127	A0A026WJN7	A0A026WXX5	Exportin-1.	Uncharacterized protein.	0.744
DMN91_010334	DMN91_002662	A0A026VZ78	A0A026WLL2	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RNA and export factor-binding protein.	0.673
DMN91_010334	DMN91_008118	A0A026VZ78	A0A026WJN7	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Exportin-1.	0.401
DMN91_010334	DMN91_011854	A0A026VZ78	A0A026WQF6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup98-Nup96.	0.997
DMN91_010334	X777_04247	A0A026VZ78	A0A026WJ15	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear RNA export factor.	0.754
DMN91_010334	X777_12986	A0A026VZ78	A0A026VXJ3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
DMN91_010334	X777_13127	A0A026VZ78	A0A026WXX5	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.968