STRINGSTRING
X777_06580 X777_06580 X777_09911 X777_09911 X777_09680 X777_09680 X777_09878 X777_09878 X777_10484 X777_10484 DMN91_009816 DMN91_009816 X777_10720 X777_10720 X777_11571 X777_11571 DMN91_012022 DMN91_012022 DMN91_010334 DMN91_010334 DMN91_009542 DMN91_009542 X777_13866 X777_13866 X777_14294 X777_14294 X777_12986 X777_12986 X777_15262 X777_15262 DMN91_012410 DMN91_012410 DMN91_012495 DMN91_012495 DMN91_012241 DMN91_012241 X777_07784 X777_07784 X777_07916 X777_07916 DMN91_004003 DMN91_004003 DMN91_003595 DMN91_003595 DMN91_004226 DMN91_004226 DMN91_010599 DMN91_010599 DMN91_003646 DMN91_003646 DMN91_002611 DMN91_002611 X777_13127 X777_13127 X777_15326 X777_15326 X777_08387 X777_08387 X777_08235 X777_08235 DMN91_007491 DMN91_007491 DMN91_011112 DMN91_011112 X777_15075 X777_15075 X777_13391 X777_13391 DMN91_000720 DMN91_000720 X777_14908 X777_14908 DMN91_011117 DMN91_011117 X777_14723 X777_14723 X777_15021 X777_15021 DMN91_008762 DMN91_008762 X777_01208 X777_01208 X777_14695 X777_14695 X777_14714 X777_14714 X777_01063 X777_01063 DMN91_011854 DMN91_011854 DMN91_002981 DMN91_002981 DMN91_003321 DMN91_003321 X777_02488 X777_02488 DMN91_002662 DMN91_002662 DMN91_001297 DMN91_001297 X777_02711 X777_02711 X777_03111 X777_03111 X777_04354 X777_04354 X777_04247 X777_04247 DMN91_011318 DMN91_011318 X777_04094 X777_04094 X777_04929 X777_04929 X777_03776 X777_03776 X777_04355 X777_04355 X777_04486 X777_04486 DMN91_010996 DMN91_010996 X777_06008 X777_06008 X777_05837 X777_05837 X777_06581 X777_06581
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X777_06580Nuclear RNA export factor. (298 aa)
X777_09911Nuclear pore membrane glycoprotein. (1590 aa)
X777_09680Protein CASC3. (799 aa)
X777_09878SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
X777_10484Nuclear pore complex protein. (1862 aa)
DMN91_009816THO complex subunit 5-like protein. (667 aa)
X777_10720Nucleoporin GLE1. (705 aa)
X777_11571NTF2-related export protein. (148 aa)
DMN91_012022mRNA export factor. (355 aa)
DMN91_010334Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (813 aa)
DMN91_009542RNA-binding protein with serine-rich domain. (325 aa)
X777_13866Nucleoporin NDC1. (440 aa)
X777_14294Regulator of nonsense transcripts 3A. (601 aa)
X777_12986Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (626 aa)
X777_15262THO complex subunit 6-like protein. (331 aa)
DMN91_012410Nuclear pore complex protein. (1135 aa)
DMN91_012495ATP-dependent RNA helicase WM6. (424 aa)
DMN91_012241Nuclear pore complex protein. (1319 aa)
X777_07784Serine/arginine-rich splicing factor. (177 aa)
X777_07916Nucleoporin Nup37. (322 aa)
DMN91_004003Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (409 aa)
DMN91_003595RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (166 aa)
DMN91_004226SAP domain-containing ribonucleoprotein. (250 aa)
DMN91_010599Splicing factor U2af 38 kDa subunit. (240 aa)
DMN91_003646Nuclear pore complex protein Nup50. (530 aa)
DMN91_002611Splicing factor U2af 38 kDa subunit. (240 aa)
X777_13127Uncharacterized protein. (1397 aa)
X777_15326THO complex subunit. (321 aa)
X777_08387Pre-mRNA-processing factor. (613 aa)
X777_08235Serine/arginine repetitive matrix protein. (1205 aa)
DMN91_007491Eukaryotic initiation factor 4A-III. (402 aa)
DMN91_011112Nuclear cap-binding protein subunit. (794 aa)
X777_15075Pre-mRNA-splicing factor Slu7. (332 aa)
X777_13391Putative splicing factor, arginine/serine-rich. (488 aa)
DMN91_000720Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1139 aa)
X777_14908THO complex subunit. (1403 aa)
DMN91_011117Nuclear RNA export factor. (529 aa)
X777_14723Serine/arginine-rich splicing factor 1A. (249 aa)
X777_15021Nuclear pore complex protein Nup88. (753 aa)
DMN91_008762Nuclear pore protein. (827 aa)
X777_01208E3 SUMO-protein ligase RanBP2. (2666 aa)
X777_14695Polymerase delta-interacting protein. (304 aa)
X777_14714Pre-mRNA-splicing factor SLU7. (457 aa)
X777_01063Nucleoporin-like protein. (1872 aa)
DMN91_011854Nuclear pore complex protein Nup98-Nup96. (1922 aa)
DMN91_002981Putative nucleoporin Nup58. (490 aa)
DMN91_003321THO complex subunit 7-like protein. (203 aa)
X777_02488RNA-binding protein Rsf1. (196 aa)
DMN91_002662RNA and export factor-binding protein. (249 aa)
DMN91_001297Protein mago nashi. (160 aa)
X777_02711Putative nucleoporin Nup54. (691 aa)
X777_03111U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (432 aa)
X777_04354Zinc finger CCCH domain-containing protein 11A. (205 aa)
X777_04247Nuclear RNA export factor. (708 aa)
DMN91_011318Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
X777_04094Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (318 aa)
X777_04929Nucleoprotein TPR. (2267 aa)
X777_03776Nuclear pore complex protein. (1569 aa)
X777_04355Uncharacterized protein. (308 aa)
X777_04486THO complex subunit. (654 aa)
DMN91_010996Nuclear pore complex protein-like protein. (1413 aa)
X777_06008Nuclear pore glycoprotein p62. (399 aa)
X777_05837RNA-binding protein. (147 aa)
X777_06581Tap-RNA_bind domain-containing protein. (219 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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