22 items (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_04468	Mothers against decapentaplegic homolog. (400 aa)
	X777_04570	E3 ubiquitin-protein ligase. (848 aa)
	DMN91_006618	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (497 aa)
	X777_03168	Poly [ADP-ribose] polymerase. (986 aa)
	DMN91_006616	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (493 aa)
	X777_01238	Polyubiquitin-A. (839 aa)
	X777_14899	Sodium/potassium-transporting ATPase subunit beta-2. (326 aa)
	DMN91_009300	Sodium/potassium-transporting ATPase subunit beta-2. (315 aa)
	X777_14898	Sodium/potassium-transporting ATPase subunit beta-2. (333 aa)
	DMN91_009557	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	X777_08282	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (127 aa)
	X777_12045	Protein phosphatase 1B. (377 aa)
	DMN91_006130	Puff-specific protein Bx42. (542 aa)
	X777_10145	Mothers against decapentaplegic homolog. (647 aa)
	DMN91_002614	Ubiquitin-60S ribosomal protein L40. (128 aa)
	X777_01504	Ski oncogene. (785 aa)
	DMN91_001357	Polyubiquitin-A. (458 aa)
	X777_15168	Homeobox protein AKR. (336 aa)
	X777_11768	Nuclear receptor corepressor. (1394 aa)
	X777_11771	Nuclear receptor corepressor. (899 aa)
	X777_06520	Putative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family. (2313 aa)
	X777_04485	E3 ubiquitin-protein ligase. (892 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_001357	DMN91_002614	A0A026VWK9	A0A026X3M9	Polyubiquitin-A.	Ubiquitin-60S ribosomal protein L40.	0.952
DMN91_001357	DMN91_009557	A0A026VWK9	A0A026WXK5	Polyubiquitin-A.	Ubiquitin-40S ribosomal protein S27a.	0.925
DMN91_001357	X777_01504	A0A026VWK9	A0A026VTG4	Polyubiquitin-A.	Ski oncogene.	0.475
DMN91_001357	X777_03168	A0A026VWK9	A0A026WPG3	Polyubiquitin-A.	Poly [ADP-ribose] polymerase.	0.479
DMN91_001357	X777_04485	A0A026VWK9	A0A026WH76	Polyubiquitin-A.	E3 ubiquitin-protein ligase.	0.795
DMN91_001357	X777_04570	A0A026VWK9	A0A026WHG8	Polyubiquitin-A.	E3 ubiquitin-protein ligase.	0.756
DMN91_001357	X777_06520	A0A026VWK9	A0A026WEI3	Polyubiquitin-A.	Putative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family.	0.525
DMN91_001357	X777_08282	A0A026VWK9	A0A026WYC9	Polyubiquitin-A.	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.935
DMN91_001357	X777_10145	A0A026VWK9	A0A026X2I2	Polyubiquitin-A.	Mothers against decapentaplegic homolog.	0.472
DMN91_001357	X777_12045	A0A026VWK9	A0A026WZR5	Polyubiquitin-A.	Protein phosphatase 1B.	0.582
DMN91_002614	DMN91_001357	A0A026X3M9	A0A026VWK9	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.952
DMN91_002614	DMN91_006616	A0A026X3M9	A0A026WPY7	Ubiquitin-60S ribosomal protein L40.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.439
DMN91_002614	DMN91_006618	A0A026X3M9	A0A026WND6	Ubiquitin-60S ribosomal protein L40.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.439
DMN91_002614	DMN91_009557	A0A026X3M9	A0A026WXK5	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.999
DMN91_002614	X777_01238	A0A026X3M9	A0A026WRG4	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.995
DMN91_002614	X777_04485	A0A026X3M9	A0A026WH76	Ubiquitin-60S ribosomal protein L40.	E3 ubiquitin-protein ligase.	0.920
DMN91_002614	X777_04570	A0A026X3M9	A0A026WHG8	Ubiquitin-60S ribosomal protein L40.	E3 ubiquitin-protein ligase.	0.809
DMN91_002614	X777_06520	A0A026X3M9	A0A026WEI3	Ubiquitin-60S ribosomal protein L40.	Putative ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family.	0.474
DMN91_002614	X777_08282	A0A026X3M9	A0A026WYC9	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.984
DMN91_002614	X777_11768	A0A026X3M9	A0A026W0T3	Ubiquitin-60S ribosomal protein L40.	Nuclear receptor corepressor.	0.449