20 items (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_010034	Transcription factor Dp-1. (485 aa)
	DMN91_009557	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	X777_16857	Cyclin-dependent kinase. (455 aa)
	X777_01238	Polyubiquitin-A. (839 aa)
	X777_02600	KxDL domain-containing protein. (201 aa)
	DMN91_002515	Menin. (611 aa)
	DMN91_005994	CYCLIN domain-containing protein; Belongs to the cyclin family. (304 aa)
	DMN91_001351	Gamma-glutamylcyclotransferase. (176 aa)
	X777_04468	Mothers against decapentaplegic homolog. (400 aa)
	X777_07093	Cyclin-C; Belongs to the cyclin family. (266 aa)
	DMN91_011574	Cyclin-K; Belongs to the cyclin family. (414 aa)
	DMN91_001357	Polyubiquitin-A. (458 aa)
	DMN91_002614	Ubiquitin-60S ribosomal protein L40. (128 aa)
	X777_10145	Mothers against decapentaplegic homolog. (647 aa)
	X777_10070	Transcription factor E2F5. (326 aa)
	X777_00600	Furin; Belongs to the peptidase S8 family. (980 aa)
	DMN91_004634	Retinoblastoma-like protein. (1039 aa)
	X777_08356	Protein yorkie. (204 aa)
	X777_09337	Cyclin-T; Belongs to the cyclin family. (1472 aa)
	DMN91_004814	Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (381 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_001351	DMN91_001357	A0A026WGK4	A0A026VWK9	Gamma-glutamylcyclotransferase.	Polyubiquitin-A.	0.758
DMN91_001351	DMN91_002614	A0A026WGK4	A0A026X3M9	Gamma-glutamylcyclotransferase.	Ubiquitin-60S ribosomal protein L40.	0.991
DMN91_001351	DMN91_004634	A0A026WGK4	A0A026X1C4	Gamma-glutamylcyclotransferase.	Retinoblastoma-like protein.	0.519
DMN91_001351	X777_01238	A0A026WGK4	A0A026WRG4	Gamma-glutamylcyclotransferase.	Polyubiquitin-A.	0.758
DMN91_001351	X777_02600	A0A026WGK4	A0A026WQG3	Gamma-glutamylcyclotransferase.	KxDL domain-containing protein.	0.601
DMN91_001351	X777_08356	A0A026WGK4	A0A026X1A6	Gamma-glutamylcyclotransferase.	Protein yorkie.	0.486
DMN91_001357	DMN91_001351	A0A026VWK9	A0A026WGK4	Polyubiquitin-A.	Gamma-glutamylcyclotransferase.	0.758
DMN91_001357	DMN91_002614	A0A026VWK9	A0A026X3M9	Polyubiquitin-A.	Ubiquitin-60S ribosomal protein L40.	0.952
DMN91_001357	DMN91_004634	A0A026VWK9	A0A026X1C4	Polyubiquitin-A.	Retinoblastoma-like protein.	0.531
DMN91_001357	DMN91_009557	A0A026VWK9	A0A026WXK5	Polyubiquitin-A.	Ubiquitin-40S ribosomal protein S27a.	0.925
DMN91_001357	X777_02600	A0A026VWK9	A0A026WQG3	Polyubiquitin-A.	KxDL domain-containing protein.	0.436
DMN91_001357	X777_08356	A0A026VWK9	A0A026X1A6	Polyubiquitin-A.	Protein yorkie.	0.478
DMN91_001357	X777_10145	A0A026VWK9	A0A026X2I2	Polyubiquitin-A.	Mothers against decapentaplegic homolog.	0.472
DMN91_002515	X777_10145	A0A026WQC4	A0A026X2I2	Menin.	Mothers against decapentaplegic homolog.	0.474
DMN91_002614	DMN91_001351	A0A026X3M9	A0A026WGK4	Ubiquitin-60S ribosomal protein L40.	Gamma-glutamylcyclotransferase.	0.991
DMN91_002614	DMN91_001357	A0A026X3M9	A0A026VWK9	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.952
DMN91_002614	DMN91_009557	A0A026X3M9	A0A026WXK5	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.999
DMN91_002614	X777_01238	A0A026X3M9	A0A026WRG4	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.995
DMN91_002614	X777_08356	A0A026X3M9	A0A026X1A6	Ubiquitin-60S ribosomal protein L40.	Protein yorkie.	0.567
DMN91_004634	DMN91_001351	A0A026X1C4	A0A026WGK4	Retinoblastoma-like protein.	Gamma-glutamylcyclotransferase.	0.519