(30 nodes) Protein folding network (Ooceraea biroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	X777_12143	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (541 aa)
	DMN91_003565	Prefoldin subunit. (151 aa)
	X777_15681	T-complex protein 1 subunit zeta. (513 aa)
	DMN91_012520	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (350 aa)
	DMN91_009453	T-complex protein 1 subunit gamma. (550 aa)
	DMN91_003343	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (190 aa)
	DMN91_001993	T-complex protein 1 subunit theta. (545 aa)
	DMN91_003520	Tubulin-specific chaperone E. (527 aa)
	DMN91_009685	Guanine nucleotide-binding protein subunit beta-5. (349 aa)
	DMN91_007616	T-complex protein 1 subunit delta. (540 aa)
	X777_08663	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (127 aa)
	X777_06226	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (221 aa)
	X777_07383	T-complex protein 1 subunit beta. (490 aa)
	X777_07161	Regulator of G-protein signaling. (846 aa)
	DMN91_012506	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (417 aa)
	DMN91_012185	Regulator of G-protein signaling. (518 aa)
	X777_04935	Phosducin-like protein. (283 aa)
	X777_04867	Brefeldin A-inhibited guanine nucleotide-exchange protein. (1586 aa)
	DMN91_001045	Prefoldin subunit. (163 aa)
	X777_04011	Uncharacterized protein. (653 aa)
	DMN91_000964	Tubulin-specific chaperone C. (343 aa)
	X777_03254	Tubulin-specific chaperone D. (1159 aa)
	DMN91_000791	Prefoldin subunit. (129 aa)
	DMN91_008741	T-complex protein 1 subunit epsilon. (541 aa)
	X777_02215	T-complex protein 1 subunit alpha. (557 aa)
	DMN91_011118	Prefoldin subunit. (126 aa)
	DMN91_007792	Guanine nucleotide-binding protein subunit beta-2. (346 aa)
	X777_13067	Tubulin-specific chaperone A; Belongs to the TBCA family. (118 aa)
	X777_07921	Tubulin-folding cofactor B. (244 aa)
	X777_07817	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1. (437 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_000791	DMN91_001045	A0A026WNP1	A0A026WHE6	Prefoldin subunit.	Prefoldin subunit.	0.999
DMN91_000791	DMN91_001993	A0A026WNP1	A0A026W243	Prefoldin subunit.	T-complex protein 1 subunit theta.	0.691
DMN91_000791	DMN91_003343	A0A026WNP1	A0A026W120	Prefoldin subunit.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.999
DMN91_000791	DMN91_003565	A0A026WNP1	A0A026VSX7	Prefoldin subunit.	Prefoldin subunit.	0.999
DMN91_000791	DMN91_007616	A0A026WNP1	A0A026W822	Prefoldin subunit.	T-complex protein 1 subunit delta.	0.846
DMN91_000791	DMN91_008741	A0A026WNP1	A0A026WP54	Prefoldin subunit.	T-complex protein 1 subunit epsilon.	0.657
DMN91_000791	DMN91_009453	A0A026WNP1	A0A026W022	Prefoldin subunit.	T-complex protein 1 subunit gamma.	0.593
DMN91_000791	DMN91_011118	A0A026WNP1	A0A026WU76	Prefoldin subunit.	Prefoldin subunit.	0.999
DMN91_000791	X777_02215	A0A026WNP1	A0A026WPB8	Prefoldin subunit.	T-complex protein 1 subunit alpha.	0.890
DMN91_000791	X777_04011	A0A026WNP1	A0A026WJI1	Prefoldin subunit.	Uncharacterized protein.	0.528
DMN91_000791	X777_07383	A0A026WNP1	A0A026WCT3	Prefoldin subunit.	T-complex protein 1 subunit beta.	0.715
DMN91_000791	X777_08663	A0A026WNP1	A0A026W939	Prefoldin subunit.	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.	0.999
DMN91_000791	X777_12143	A0A026WNP1	A0A026W0P5	Prefoldin subunit.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.636
DMN91_000791	X777_15681	A0A026WNP1	A0A026VUX8	Prefoldin subunit.	T-complex protein 1 subunit zeta.	0.636
DMN91_000964	DMN91_003520	A0A026WL76	A0A026W415	Tubulin-specific chaperone C.	Tubulin-specific chaperone E.	0.763
DMN91_000964	X777_03254	A0A026WL76	A0A026WLQ2	Tubulin-specific chaperone C.	Tubulin-specific chaperone D.	0.779
DMN91_000964	X777_07921	A0A026WL76	A0A026X0I9	Tubulin-specific chaperone C.	Tubulin-folding cofactor B.	0.714
DMN91_000964	X777_13067	A0A026WL76	A0A026WXR9	Tubulin-specific chaperone C.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.714
DMN91_001045	DMN91_000791	A0A026WHE6	A0A026WNP1	Prefoldin subunit.	Prefoldin subunit.	0.999
DMN91_001045	DMN91_001993	A0A026WHE6	A0A026W243	Prefoldin subunit.	T-complex protein 1 subunit theta.	0.802