STRINGSTRING
X777_12449 X777_12449 X777_14302 X777_14302 DMN91_001357 DMN91_001357 X777_15488 X777_15488 X777_06179 X777_06179 DMN91_002614 DMN91_002614 DMN91_009557 DMN91_009557 X777_16873 X777_16873 X777_16818 X777_16818 X777_01001 X777_01001 X777_01238 X777_01238 DMN91_005998 DMN91_005998 DMN91_002489 DMN91_002489 X777_03106 X777_03106 DMN91_005052 DMN91_005052 DMN91_006864 DMN91_006864 DMN91_011772 DMN91_011772
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X777_12449Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (152 aa)
X777_14302Microtubule-associated proteins 1A/1B light chain 3B. (275 aa)
DMN91_001357Polyubiquitin-A. (458 aa)
X777_15488Serine/threonine-protein kinase PINK1, mitochondrial. (626 aa)
X777_06179Autophagy protein 5; Involved in autophagic vesicle formation. (265 aa)
DMN91_002614Ubiquitin-60S ribosomal protein L40. (128 aa)
DMN91_009557Ubiquitin-40S ribosomal protein S27a. (156 aa)
X777_16873Transmembrane GTPase Marf; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
X777_16818Mitochondrial import receptor subunit TOM7-like protein. (54 aa)
X777_01001Mitochondrial import receptor subunit TOM22-like protein. (141 aa)
X777_01238Polyubiquitin-A. (839 aa)
DMN91_005998Mitochondrial import receptor subunit TOM40-like protein. (333 aa)
DMN91_002489Voltage-dependent anion-selective channel. (273 aa)
X777_03106E3 ubiquitin-protein ligase parkin. (500 aa)
DMN91_005052mTERF domain-containing protein 1, mitochondrial. (404 aa)
DMN91_006864Mitochondrial import receptor subunit TOM40-like protein. (325 aa)
DMN91_011772Sequestosome-1. (508 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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